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Reduced body weight is a common effect of gene knockout in mice

BACKGROUND: During a search for obesity candidate genes in a small region of the mouse genome, we noticed that many genes when knocked out influence body weight. To determine whether this was a general feature of gene knockout or a chance occurrence, we surveyed the Jackson Laboratory Mouse Genome D...

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Autores principales: Reed, Danielle R, Lawler, Maureen P, Tordoff, Michael G
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2263071/
https://www.ncbi.nlm.nih.gov/pubmed/18182103
http://dx.doi.org/10.1186/1471-2156-9-4
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author Reed, Danielle R
Lawler, Maureen P
Tordoff, Michael G
author_facet Reed, Danielle R
Lawler, Maureen P
Tordoff, Michael G
author_sort Reed, Danielle R
collection PubMed
description BACKGROUND: During a search for obesity candidate genes in a small region of the mouse genome, we noticed that many genes when knocked out influence body weight. To determine whether this was a general feature of gene knockout or a chance occurrence, we surveyed the Jackson Laboratory Mouse Genome Database for knockout mouse strains and their phenotypes. Body weights were not available for all strains so we also obtained body weight information by contacting a random sample of investigators responsible for a knockout strain. RESULTS: We classified each knockout mouse strain as (1) lighter and smaller, (2) larger and heavier, or (3) the same weight, relative to control mice. We excluded knockout strains that died early in life, even though this type of lethality is often associated with a small embryo or reduced body size. Based on a dataset of 1,977 knockout strains, we found that that 31% of viable knockout mouse strains weighed less and an additional 3% weighed more than did controls. CONCLUSION: Body weight is potentially a latent variable in about a third of experiments that use knockout mice and should be considered in interpreting experimental outcomes, e.g., in studies of hypertension, drug and hormone metabolism, organ development, cell proliferation and apoptosis, digestion, heart rate, or atherosclerosis. If we assume that the knockout genes we surveyed are representative then upward of 6,000 genes are predicted to influence the size of a mouse. Body weight is highly heritable, and numerous quantitative trait loci have been mapped in mice, but "multigenic" is an insufficient term for the thousands of loci that could contribute to this complex trait.
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spelling pubmed-22630712008-03-06 Reduced body weight is a common effect of gene knockout in mice Reed, Danielle R Lawler, Maureen P Tordoff, Michael G BMC Genet Correspondence BACKGROUND: During a search for obesity candidate genes in a small region of the mouse genome, we noticed that many genes when knocked out influence body weight. To determine whether this was a general feature of gene knockout or a chance occurrence, we surveyed the Jackson Laboratory Mouse Genome Database for knockout mouse strains and their phenotypes. Body weights were not available for all strains so we also obtained body weight information by contacting a random sample of investigators responsible for a knockout strain. RESULTS: We classified each knockout mouse strain as (1) lighter and smaller, (2) larger and heavier, or (3) the same weight, relative to control mice. We excluded knockout strains that died early in life, even though this type of lethality is often associated with a small embryo or reduced body size. Based on a dataset of 1,977 knockout strains, we found that that 31% of viable knockout mouse strains weighed less and an additional 3% weighed more than did controls. CONCLUSION: Body weight is potentially a latent variable in about a third of experiments that use knockout mice and should be considered in interpreting experimental outcomes, e.g., in studies of hypertension, drug and hormone metabolism, organ development, cell proliferation and apoptosis, digestion, heart rate, or atherosclerosis. If we assume that the knockout genes we surveyed are representative then upward of 6,000 genes are predicted to influence the size of a mouse. Body weight is highly heritable, and numerous quantitative trait loci have been mapped in mice, but "multigenic" is an insufficient term for the thousands of loci that could contribute to this complex trait. BioMed Central 2008-01-08 /pmc/articles/PMC2263071/ /pubmed/18182103 http://dx.doi.org/10.1186/1471-2156-9-4 Text en Copyright © 2008 Reed et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Correspondence
Reed, Danielle R
Lawler, Maureen P
Tordoff, Michael G
Reduced body weight is a common effect of gene knockout in mice
title Reduced body weight is a common effect of gene knockout in mice
title_full Reduced body weight is a common effect of gene knockout in mice
title_fullStr Reduced body weight is a common effect of gene knockout in mice
title_full_unstemmed Reduced body weight is a common effect of gene knockout in mice
title_short Reduced body weight is a common effect of gene knockout in mice
title_sort reduced body weight is a common effect of gene knockout in mice
topic Correspondence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2263071/
https://www.ncbi.nlm.nih.gov/pubmed/18182103
http://dx.doi.org/10.1186/1471-2156-9-4
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