A Scaffold Analysis Tool Using Mate-Pair Information in Genome Sequencing

We have developed a Windows-based program, ConPath, as a scaffold analyzer. ConPath constructs scaffolds by ordering and orienting separate sequence contigs by exploiting the mate-pair information between contig-pairs. Our algorithm builds directed graphs from link information and traverses them to...

Descripción completa

Detalles Bibliográficos
Autores principales: Kim, Pan-Gyu, Cho, Hwan-Gue, Park, Kiejung
Formato: Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2008
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2291285/
https://www.ncbi.nlm.nih.gov/pubmed/18414585
http://dx.doi.org/10.1155/2008/675741

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2291285/
https://www.ncbi.nlm.nih.gov/pubmed/18414585
http://dx.doi.org/10.1155/2008/675741

Ejemplares similares