SIGffRid: A tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically driven statistics

BACKGROUND: Many programs have been developed to identify transcription factor binding sites. However, most of them are not able to infer two-word motifs with variable spacer lengths. This case is encountered for RNA polymerase Sigma (σ) Factor Binding Sites (SFBSs) usually composed of two boxes, ca...

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Detalles Bibliográficos
Autores principales: Touzain, Fabrice, Schbath, Sophie, Debled-Rennesson, Isabelle, Aigle, Bertrand, Kucherov, Gregory, Leblond, Pierre
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2375139/
https://www.ncbi.nlm.nih.gov/pubmed/18237374
http://dx.doi.org/10.1186/1471-2105-9-73

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2375139/
https://www.ncbi.nlm.nih.gov/pubmed/18237374
http://dx.doi.org/10.1186/1471-2105-9-73

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