SCANPS: a web server for iterative protein sequence database searching by dynamic programing, with display in a hierarchical SCOP browser

SCANPS performs iterative profile searching similar to PSI-BLAST but with full dynamic programing on each cycle and on-the-fly estimation of significance. This combination gives good sensitivity and selectivity that outperforms PSI-BLAST in domain-searching benchmarks. Although computationally expen...

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Detalles Bibliográficos
Autores principales: Walsh, Thomas P., Webber, Caleb, Searle, Stephen, Sturrock, Shane S., Barton, Geoffrey J.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447745/
https://www.ncbi.nlm.nih.gov/pubmed/18503088
http://dx.doi.org/10.1093/nar/gkn320

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447745/
https://www.ncbi.nlm.nih.gov/pubmed/18503088
http://dx.doi.org/10.1093/nar/gkn320

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