Cargando…

Systematic analysis of enzymatic DNA polymerization using oligo-DNA templates and triphosphate analogs involving 2′,4′-bridged nucleosides

In order to systematically analyze the effects of nucleoside modification of sugar moieties in DNA polymerase reactions, we synthesized 16 modified templates containing 2′,4′-bridged nucleotides and three types of 2′,4′-bridged nucleoside-5′-triphospates with different bridging structures. Among the...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kuwahara, Masayasu, Obika, Satoshi, Nagashima, Jun-ichi, Ohta, Yuki, Suto, Yoshiyuki, Ozaki, Hiroaki, Sawai, Hiroaki, Imanishi, Takeshi
Formato:	Texto
Lenguaje:	English
Publicado:	Oxford University Press 2008
Materias:	Chemistry and Synthetic Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2490744/ https://www.ncbi.nlm.nih.gov/pubmed/18583360 http://dx.doi.org/10.1093/nar/gkn404

Ejemplares similares

Study on Suitability of KOD DNA Polymerase for Enzymatic Production of Artificial Nucleic Acids Using Base/Sugar Modified Nucleoside Triphosphates
por: Kuwahara, Masayasu, et al.
Publicado: (2010)

Systematic characterization of 2′-deoxynucleoside- 5′-triphosphate analogs as substrates for DNA polymerases by polymerase chain reaction and kinetic studies on enzymatic production of modified DNA
por: Kuwahara, Masayasu, et al.
Publicado: (2006)

Enzymatic Primer-Extension with Glycerol-Nucleoside Triphosphates on DNA Templates
por: Chen, Jesse J., et al.
Publicado: (2009)

Double-stranded DNA-templated cleavage of oligonucleotides containing a P3′→N5′ linkage triggered by triplex formation: the effects of chemical modifications and remarkable enhancement in reactivity
por: Ito, Kosuke Ramon, et al.
Publicado: (2010)

A bridged nucleic acid, 2′,4′-BNA(COC): synthesis of fully modified oligonucleotides bearing thymine, 5-methylcytosine, adenine and guanine 2′,4′-BNA(COC) monomers and RNA-selective nucleic-acid recognition
por: Mitsuoka, Yasunori, et al.
Publicado: (2009)

Expanding the repertoire of DNA polymerase substrates: template-instructed incorporation of non-nucleoside triphosphate analogues by DNA polymerases β and λ
por: Crespan, Emmanuele, et al.
Publicado: (2007)

Allostery of DNA nanostructures controlled by enzymatic modifications
por: Yan, Qi, et al.
Publicado: (2020)

The strength of the template effect attracting nucleotides to naked DNA
por: Kervio, Eric, et al.
Publicado: (2014)

Reconfiguration of DNA nanostructures induced by enzymatic ligation treatment
por: Bai, Tanxi, et al.
Publicado: (2022)

Binary control of enzymatic cleavage of DNA origami by structural antideterminants
por: Stopar, Alex, et al.
Publicado: (2018)

Influence of C-5 substituted cytosine and related nucleoside analogs on the formation of benzo[a]pyrene diol epoxide-dG adducts at CG base pairs of DNA
por: Guza, Rebecca, et al.
Publicado: (2011)

Fluorescent xDNA nucleotides as efficient substrates for a template-independent polymerase
por: Jarchow-Choy, Sarah K., et al.
Publicado: (2011)

DNA models of trinucleotide frameshift deletions: the formation of loops and bulges at the primer–template junction
por: Baase, Walter A., et al.
Publicado: (2009)

4-vinyl-substituted pyrimidine nucleosides exhibit the efficient and selective formation of interstrand cross-links with RNA and duplex DNA
por: Nishimoto, Atsushi, et al.
Publicado: (2013)

Recognition of O(6)-benzyl-2′-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction
por: Kowal, Ewa A., et al.
Publicado: (2013)

Permanent or reversible conjugation of 2′-O- or 5′-O-aminooxymethylated nucleosides with functional groups as a convenient and efficient approach to the modification of RNA and DNA sequences
por: Cieślak, Jacek, et al.
Publicado: (2012)

Lipid-linked nucleoside triphosphates for enzymatic synthesis of hydrophobic oligonucleotides with enhanced membrane anchoring efficiency
por: Kodr, David, et al.
Publicado: (2023)

Modified nucleoside triphosphates exist in mammals
por: Jiang, Han-Peng, et al.
Publicado: (2018)

Influence of cationic molecules on the hairpin to duplex equilibria of self-complementary DNA and RNA oligonucleotides
por: Nakano, Shu-ichi, et al.
Publicado: (2007)

The effects of unnatural base pairs and mispairs on DNA duplex stability and solvation
por: Hwang, Gil Tae, et al.
Publicado: (2009)

Properties of pseudo-complementary DNA substituted with weakly pairing analogs of guanine or cytosine
por: Lahoud, Georges, et al.
Publicado: (2008)

Modified Nucleoside Triphosphates for In-vitro Selection Techniques
por: Dellafiore, María A., et al.
Publicado: (2016)

Nucleoside diphosphate and triphosphate prodrugs – An unsolvable task?
por: Meier, Chris
Publicado: (2017)

Structural and Affinity Analyses of G-Quadruplex DNA Aptamers for Camptothecin Derivatives
por: Fujita, Hiroto, et al.
Publicado: (2013)

Incorporation of non-nucleoside triphosphate analogues opposite to an abasic site by human DNA polymerases β and λ
por: Crespan, Emmanuele, et al.
Publicado: (2005)

Template-directed addition of nucleosides to DNA by the BfiI restriction enzyme
por: Sasnauskas, Giedrius, et al.
Publicado: (2008)

Synergistic effects between analogs of DNA and RNA improve the potency of siRNA-mediated gene silencing
por: Deleavey, Glen F., et al.
Publicado: (2010)

N (4)-acyl-2′-deoxycytidine-5′-triphosphates for the enzymatic synthesis of modified DNA
por: Jakubovska, Jevgenija, et al.
Publicado: (2018)

Nucleoside Triphosphates — Building Blocks for the Modification of Nucleic Acids
por: Hollenstein, Marcel
Publicado: (2012)

The role of nucleoside triphosphate hydrolase metallochaperones in making metalloenzymes
por: Vaccaro, Francesca A, et al.
Publicado: (2022)

A capillary electrophoresis method for the characterization of ecto-nucleoside triphosphate diphosphohydrolases (NTPDases) and the analysis of inhibitors by in-capillary enzymatic microreaction
por: Iqbal, Jamshed, et al.
Publicado: (2005)

Entrapment of DNA topoisomerase-DNA complexes by nucleotide/nucleoside analogs
por: Gmeiner, William H.
Publicado: (2019)

Influences of Linker and Nucleoside for the Helical Self-Assembly of Perylene Along DNA Templates
por: Fritz, Yannic, et al.
Publicado: (2019)

Lighting up left-handed Z-DNA: photoluminescent carbon dots induce DNA B to Z transition and perform DNA logic operations
por: Feng, Lingyan, et al.
Publicado: (2013)

Contrasting enantioselective DNA preference: chiral helical macrocyclic lanthanide complex binding to DNA
por: Zhao, Chuanqi, et al.
Publicado: (2012)

Conformationally rigid nucleoside probes help understand the role of sugar pucker and nucleobase orientation in the thrombin-binding aptamer
por: Saneyoshi, Hisao, et al.
Publicado: (2009)

Algorithms for automated DNA assembly
por: Densmore, Douglas, et al.
Publicado: (2010)

Synthesis and structural characterization of piperazino-modified DNA that favours hybridization towards DNA over RNA
por: Skov, Joan, et al.
Publicado: (2011)

Lipophilic prodrugs of nucleoside triphosphates as biochemical probes and potential antivirals
por: Gollnest, Tristan, et al.
Publicado: (2015)

Synthesis of α-l-Threofuranosyl Nucleoside Triphosphates (tNTPs)
por: Zou, Keyong, et al.
Publicado: (2005)

Cannot write session to /tmp/vufind_sessions/sess_6gro7hdbrjsl9to5rhtckhkr18