A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes

BACKGROUND: The challenges of accurate gene prediction and enumeration are further aggravated in large genomes that contain highly repetitive transposable elements (TEs). Yet TEs play a substantial role in genome evolution and are themselves an important subject of study. Repeat annotation, based on...

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Detalles Bibliográficos
Autores principales: Kurtz, Stefan, Narechania, Apurva, Stein, Joshua C, Ware, Doreen
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2613927/
https://www.ncbi.nlm.nih.gov/pubmed/18976482
http://dx.doi.org/10.1186/1471-2164-9-517

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2613927/
https://www.ncbi.nlm.nih.gov/pubmed/18976482
http://dx.doi.org/10.1186/1471-2164-9-517

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