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Human Rad51 mediated DNA unwinding is facilitated by conditions that favour Rad51-dsDNA aggregation

BACKGROUND: Human Rad51 (RAD51), analogous to its bacterial homolog, RecA, binds and unwinds double stranded DNA (dsDNA) in the presence of certain nucleotide cofactors. ATP hydrolysis is not required for this process, because even ATP non hydrolysable analogs like AMP-PNP and ATPγS, support DNA unw...

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Autores principales: Balakrishnan, Kamakshi, Krishnan, Neeraja M, Kulkarni, Anagha, Rao, Basuthkar J
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2630921/
https://www.ncbi.nlm.nih.gov/pubmed/19133161
http://dx.doi.org/10.1186/1471-2091-10-2
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author Balakrishnan, Kamakshi
Krishnan, Neeraja M
Kulkarni, Anagha
Rao, Basuthkar J
author_facet Balakrishnan, Kamakshi
Krishnan, Neeraja M
Kulkarni, Anagha
Rao, Basuthkar J
author_sort Balakrishnan, Kamakshi
collection PubMed
description BACKGROUND: Human Rad51 (RAD51), analogous to its bacterial homolog, RecA, binds and unwinds double stranded DNA (dsDNA) in the presence of certain nucleotide cofactors. ATP hydrolysis is not required for this process, because even ATP non hydrolysable analogs like AMP-PNP and ATPγS, support DNA unwinding. Even ADP, the product of ATP hydrolysis, feebly supports DNA unwinding. RESULTS: We find that human Rad52 (RAD52) stimulates RAD51 mediated DNA unwinding in the presence of all Adenine nucleotide cofactors, (except in AMP and no nucleotide conditions that intrinsically fail to support unwinding reaction) while enhancing aggregation of RAD51-dsDNA complexes in parallel. Interestingly, salt at low concentration can substitute the role of RAD52, in facilitating aggregation of RAD51-dsDNA complexes, that concomitantly also leads to better unwinding. CONCLUSION: RAD52 itself being a highly aggregated protein perhaps acts as scaffold to bring together RAD51 and DNA molecules into large co-aggregates of RAD52-RAD51-DNA complexes to promote RAD51 mediated DNA unwinding reaction, when appropriate nucleotide cofactors are available, presumably through macromolecular crowding effects. Our work highlights the functional link between aggregation of protein-DNA complexes and DNA unwinding in RAD51 system.
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spelling pubmed-26309212009-01-27 Human Rad51 mediated DNA unwinding is facilitated by conditions that favour Rad51-dsDNA aggregation Balakrishnan, Kamakshi Krishnan, Neeraja M Kulkarni, Anagha Rao, Basuthkar J BMC Biochem Research Article BACKGROUND: Human Rad51 (RAD51), analogous to its bacterial homolog, RecA, binds and unwinds double stranded DNA (dsDNA) in the presence of certain nucleotide cofactors. ATP hydrolysis is not required for this process, because even ATP non hydrolysable analogs like AMP-PNP and ATPγS, support DNA unwinding. Even ADP, the product of ATP hydrolysis, feebly supports DNA unwinding. RESULTS: We find that human Rad52 (RAD52) stimulates RAD51 mediated DNA unwinding in the presence of all Adenine nucleotide cofactors, (except in AMP and no nucleotide conditions that intrinsically fail to support unwinding reaction) while enhancing aggregation of RAD51-dsDNA complexes in parallel. Interestingly, salt at low concentration can substitute the role of RAD52, in facilitating aggregation of RAD51-dsDNA complexes, that concomitantly also leads to better unwinding. CONCLUSION: RAD52 itself being a highly aggregated protein perhaps acts as scaffold to bring together RAD51 and DNA molecules into large co-aggregates of RAD52-RAD51-DNA complexes to promote RAD51 mediated DNA unwinding reaction, when appropriate nucleotide cofactors are available, presumably through macromolecular crowding effects. Our work highlights the functional link between aggregation of protein-DNA complexes and DNA unwinding in RAD51 system. BioMed Central 2009-01-09 /pmc/articles/PMC2630921/ /pubmed/19133161 http://dx.doi.org/10.1186/1471-2091-10-2 Text en Copyright © 2009 Balakrishnan et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Balakrishnan, Kamakshi
Krishnan, Neeraja M
Kulkarni, Anagha
Rao, Basuthkar J
Human Rad51 mediated DNA unwinding is facilitated by conditions that favour Rad51-dsDNA aggregation
title Human Rad51 mediated DNA unwinding is facilitated by conditions that favour Rad51-dsDNA aggregation
title_full Human Rad51 mediated DNA unwinding is facilitated by conditions that favour Rad51-dsDNA aggregation
title_fullStr Human Rad51 mediated DNA unwinding is facilitated by conditions that favour Rad51-dsDNA aggregation
title_full_unstemmed Human Rad51 mediated DNA unwinding is facilitated by conditions that favour Rad51-dsDNA aggregation
title_short Human Rad51 mediated DNA unwinding is facilitated by conditions that favour Rad51-dsDNA aggregation
title_sort human rad51 mediated dna unwinding is facilitated by conditions that favour rad51-dsdna aggregation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2630921/
https://www.ncbi.nlm.nih.gov/pubmed/19133161
http://dx.doi.org/10.1186/1471-2091-10-2
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