Fine-grained parallel RNAalifold algorithm for RNA secondary structure prediction on FPGA

BACKGROUND: In the field of RNA secondary structure prediction, the RNAalifold algorithm is one of the most popular methods using free energy minimization. However, general-purpose computers including parallel computers or multi-core computers exhibit parallel efficiency of no more than 50%. Field P...

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Detalles Bibliográficos
Autores principales: Xia, Fei, Dou, Yong, Zhou, Xingming, Yang, Xuejun, Xu, Jiaqing, Zhang, Yang
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2648794/
https://www.ncbi.nlm.nih.gov/pubmed/19208138
http://dx.doi.org/10.1186/1471-2105-10-S1-S37

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2648794/
https://www.ncbi.nlm.nih.gov/pubmed/19208138
http://dx.doi.org/10.1186/1471-2105-10-S1-S37

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