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Memory-efficient dynamic programming backtrace and pairwise local sequence alignment

Motivation: A backtrace through a dynamic programming algorithm's intermediate results in search of an optimal path, or to sample paths according to an implied probability distribution, or as the second stage of a forward–backward algorithm, is a task of fundamental importance in computational...

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Detalles Bibliográficos
Autor principal: Newberg, Lee A.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2668612/
https://www.ncbi.nlm.nih.gov/pubmed/18558620
http://dx.doi.org/10.1093/bioinformatics/btn308