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The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η
A DNA lesion created by oxidative stress is 7,8-dihydro-8-oxo-guanine (8-oxoG). Because 8-oxoG can mispair with adenine during DNA synthesis, it is of interest to understand the efficiency and fidelity of 8-oxoG bypass by DNA polymerases. We quantify bypass parameters for two DNA polymerases implica...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685079/ https://www.ncbi.nlm.nih.gov/pubmed/19282446 http://dx.doi.org/10.1093/nar/gkp103 |
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author | McCulloch, Scott D. Kokoska, Robert J. Garg, Parie Burgers, Peter M. Kunkel, Thomas A. |
author_facet | McCulloch, Scott D. Kokoska, Robert J. Garg, Parie Burgers, Peter M. Kunkel, Thomas A. |
author_sort | McCulloch, Scott D. |
collection | PubMed |
description | A DNA lesion created by oxidative stress is 7,8-dihydro-8-oxo-guanine (8-oxoG). Because 8-oxoG can mispair with adenine during DNA synthesis, it is of interest to understand the efficiency and fidelity of 8-oxoG bypass by DNA polymerases. We quantify bypass parameters for two DNA polymerases implicated in 8-oxoG bypass, Pols δ and η. Yeast Pol δ and yeast Pol η both bypass 8-oxoG and misincorporate adenine during bypass. However, yeast Pol η is 10-fold more efficient than Pol δ, and following bypass Pol η switches to less processive synthesis, similar to that observed during bypass of a cis-syn thymine-thymine dimer. Moreover, yeast Pol η is at least 10-fold more accurate than yeast Pol δ during 8-oxoG bypass. These differences are maintained in the presence of the accessory proteins RFC, PCNA and RPA and are consistent with the established role of Pol η in suppressing ogg1-dependent mutagenesis in yeast. Surprisingly different results are obtained with human and mouse Pol η. Both mammalian enzymes bypass 8-oxoG efficiently, but they do so less processively, without a switch point and with much lower fidelity than yeast Pol η. The fact that yeast and mammalian Pol η have intrinsically different catalytic properties has potential biological implications. |
format | Text |
id | pubmed-2685079 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-26850792009-05-21 The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η McCulloch, Scott D. Kokoska, Robert J. Garg, Parie Burgers, Peter M. Kunkel, Thomas A. Nucleic Acids Res Genome Integrity, Repair and Replication A DNA lesion created by oxidative stress is 7,8-dihydro-8-oxo-guanine (8-oxoG). Because 8-oxoG can mispair with adenine during DNA synthesis, it is of interest to understand the efficiency and fidelity of 8-oxoG bypass by DNA polymerases. We quantify bypass parameters for two DNA polymerases implicated in 8-oxoG bypass, Pols δ and η. Yeast Pol δ and yeast Pol η both bypass 8-oxoG and misincorporate adenine during bypass. However, yeast Pol η is 10-fold more efficient than Pol δ, and following bypass Pol η switches to less processive synthesis, similar to that observed during bypass of a cis-syn thymine-thymine dimer. Moreover, yeast Pol η is at least 10-fold more accurate than yeast Pol δ during 8-oxoG bypass. These differences are maintained in the presence of the accessory proteins RFC, PCNA and RPA and are consistent with the established role of Pol η in suppressing ogg1-dependent mutagenesis in yeast. Surprisingly different results are obtained with human and mouse Pol η. Both mammalian enzymes bypass 8-oxoG efficiently, but they do so less processively, without a switch point and with much lower fidelity than yeast Pol η. The fact that yeast and mammalian Pol η have intrinsically different catalytic properties has potential biological implications. Oxford University Press 2009-05 2009-03-12 /pmc/articles/PMC2685079/ /pubmed/19282446 http://dx.doi.org/10.1093/nar/gkp103 Text en © Published by Oxford University Press 2009 http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Genome Integrity, Repair and Replication McCulloch, Scott D. Kokoska, Robert J. Garg, Parie Burgers, Peter M. Kunkel, Thomas A. The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η |
title | The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η |
title_full | The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η |
title_fullStr | The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η |
title_full_unstemmed | The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η |
title_short | The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η |
title_sort | efficiency and fidelity of 8-oxo-guanine bypass by dna polymerases δ and η |
topic | Genome Integrity, Repair and Replication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685079/ https://www.ncbi.nlm.nih.gov/pubmed/19282446 http://dx.doi.org/10.1093/nar/gkp103 |
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