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The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η

A DNA lesion created by oxidative stress is 7,8-dihydro-8-oxo-guanine (8-oxoG). Because 8-oxoG can mispair with adenine during DNA synthesis, it is of interest to understand the efficiency and fidelity of 8-oxoG bypass by DNA polymerases. We quantify bypass parameters for two DNA polymerases implica...

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Autores principales: McCulloch, Scott D., Kokoska, Robert J., Garg, Parie, Burgers, Peter M., Kunkel, Thomas A.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685079/
https://www.ncbi.nlm.nih.gov/pubmed/19282446
http://dx.doi.org/10.1093/nar/gkp103
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author McCulloch, Scott D.
Kokoska, Robert J.
Garg, Parie
Burgers, Peter M.
Kunkel, Thomas A.
author_facet McCulloch, Scott D.
Kokoska, Robert J.
Garg, Parie
Burgers, Peter M.
Kunkel, Thomas A.
author_sort McCulloch, Scott D.
collection PubMed
description A DNA lesion created by oxidative stress is 7,8-dihydro-8-oxo-guanine (8-oxoG). Because 8-oxoG can mispair with adenine during DNA synthesis, it is of interest to understand the efficiency and fidelity of 8-oxoG bypass by DNA polymerases. We quantify bypass parameters for two DNA polymerases implicated in 8-oxoG bypass, Pols δ and η. Yeast Pol δ and yeast Pol η both bypass 8-oxoG and misincorporate adenine during bypass. However, yeast Pol η is 10-fold more efficient than Pol δ, and following bypass Pol η switches to less processive synthesis, similar to that observed during bypass of a cis-syn thymine-thymine dimer. Moreover, yeast Pol η is at least 10-fold more accurate than yeast Pol δ during 8-oxoG bypass. These differences are maintained in the presence of the accessory proteins RFC, PCNA and RPA and are consistent with the established role of Pol η in suppressing ogg1-dependent mutagenesis in yeast. Surprisingly different results are obtained with human and mouse Pol η. Both mammalian enzymes bypass 8-oxoG efficiently, but they do so less processively, without a switch point and with much lower fidelity than yeast Pol η. The fact that yeast and mammalian Pol η have intrinsically different catalytic properties has potential biological implications.
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spelling pubmed-26850792009-05-21 The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η McCulloch, Scott D. Kokoska, Robert J. Garg, Parie Burgers, Peter M. Kunkel, Thomas A. Nucleic Acids Res Genome Integrity, Repair and Replication A DNA lesion created by oxidative stress is 7,8-dihydro-8-oxo-guanine (8-oxoG). Because 8-oxoG can mispair with adenine during DNA synthesis, it is of interest to understand the efficiency and fidelity of 8-oxoG bypass by DNA polymerases. We quantify bypass parameters for two DNA polymerases implicated in 8-oxoG bypass, Pols δ and η. Yeast Pol δ and yeast Pol η both bypass 8-oxoG and misincorporate adenine during bypass. However, yeast Pol η is 10-fold more efficient than Pol δ, and following bypass Pol η switches to less processive synthesis, similar to that observed during bypass of a cis-syn thymine-thymine dimer. Moreover, yeast Pol η is at least 10-fold more accurate than yeast Pol δ during 8-oxoG bypass. These differences are maintained in the presence of the accessory proteins RFC, PCNA and RPA and are consistent with the established role of Pol η in suppressing ogg1-dependent mutagenesis in yeast. Surprisingly different results are obtained with human and mouse Pol η. Both mammalian enzymes bypass 8-oxoG efficiently, but they do so less processively, without a switch point and with much lower fidelity than yeast Pol η. The fact that yeast and mammalian Pol η have intrinsically different catalytic properties has potential biological implications. Oxford University Press 2009-05 2009-03-12 /pmc/articles/PMC2685079/ /pubmed/19282446 http://dx.doi.org/10.1093/nar/gkp103 Text en © Published by Oxford University Press 2009 http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genome Integrity, Repair and Replication
McCulloch, Scott D.
Kokoska, Robert J.
Garg, Parie
Burgers, Peter M.
Kunkel, Thomas A.
The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η
title The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η
title_full The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η
title_fullStr The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η
title_full_unstemmed The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η
title_short The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η
title_sort efficiency and fidelity of 8-oxo-guanine bypass by dna polymerases δ and η
topic Genome Integrity, Repair and Replication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685079/
https://www.ncbi.nlm.nih.gov/pubmed/19282446
http://dx.doi.org/10.1093/nar/gkp103
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