CUDASW++: optimizing Smith-Waterman sequence database searches for CUDA-enabled graphics processing units

BACKGROUND: The Smith-Waterman algorithm is one of the most widely used tools for searching biological sequence databases due to its high sensitivity. Unfortunately, the Smith-Waterman algorithm is computationally demanding, which is further compounded by the exponential growth of sequence databases...

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Detalles Bibliográficos
Autores principales: Liu, Yongchao, Maskell, Douglas L, Schmidt, Bertil
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2694204/
https://www.ncbi.nlm.nih.gov/pubmed/19416548
http://dx.doi.org/10.1186/1756-0500-2-73

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2694204/
https://www.ncbi.nlm.nih.gov/pubmed/19416548
http://dx.doi.org/10.1186/1756-0500-2-73

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