Database indexing for production MegaBLAST searches

Motivation: The BLAST software package for sequence comparison speeds up homology search by preprocessing a query sequence into a lookup table. Numerous research studies have suggested that preprocessing the database instead would give better performance. However, production usage of sequence compar...

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Detalles Bibliográficos
Autores principales: Morgulis, Aleksandr, Coulouris, George, Raytselis, Yan, Madden, Thomas L., Agarwala, Richa, Schäffer, Alejandro A.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2696921/
https://www.ncbi.nlm.nih.gov/pubmed/18567917
http://dx.doi.org/10.1093/bioinformatics/btn322

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2696921/
https://www.ncbi.nlm.nih.gov/pubmed/18567917
http://dx.doi.org/10.1093/bioinformatics/btn322

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