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RegExpBlasting (REB), a Regular Expression Blasting algorithm based on multiply aligned sequences

BACKGROUND: One of the most frequent uses of bioinformatics tools concerns functional characterization of a newly produced nucleotide sequence (a query sequence) by applying Blast or FASTA against a set of sequences (the subject sequences). However, in some specific contexts, it is useful to compare...

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Detalles Bibliográficos
Autores principales: Rubino, Francesco, Attimonelli, Marcella
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2697652/
https://www.ncbi.nlm.nih.gov/pubmed/19534754
http://dx.doi.org/10.1186/1471-2105-10-S6-S5