Comparison of three microarray probe annotation pipelines: differences in strategies and their effect on downstream analysis

BACKGROUND: Reliable annotation linking oligonucleotide probes to target genes is essential for functional biological analysis of microarray experiments. We used the IMAD, OligoRAP and sigReannot pipelines to update the annotation for the ARK-Genomics Chicken 20 K array as part of a joined EADGENE/S...

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Detalles Bibliográficos
Autores principales: Neerincx, Pieter BT, Casel, Pierrot, Prickett, Dennis, Nie, Haisheng, Watson, Michael, Leunissen, Jack AM, Groenen, Martien AM, Klopp, Christophe
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2712739/
https://www.ncbi.nlm.nih.gov/pubmed/19615109
http://dx.doi.org/10.1186/1753-6561-3-S4-S1

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2712739/
https://www.ncbi.nlm.nih.gov/pubmed/19615109
http://dx.doi.org/10.1186/1753-6561-3-S4-S1

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