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Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion
A physical model of selective “ion binding” in the L-type calcium channel is constructed, and consequences of the model are compared with experimental data. This reduced model treats only ions and the carboxylate oxygens of the EEEE locus explicitly and restricts interactions to hard-core repulsion...
Autores principales: | , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
The Rockefeller University Press
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2712969/ https://www.ncbi.nlm.nih.gov/pubmed/19398776 http://dx.doi.org/10.1085/jgp.200910211 |
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author | Boda, Dezső Valiskó, Mónika Henderson, Douglas Eisenberg, Bob Gillespie, Dirk Nonner, Wolfgang |
author_facet | Boda, Dezső Valiskó, Mónika Henderson, Douglas Eisenberg, Bob Gillespie, Dirk Nonner, Wolfgang |
author_sort | Boda, Dezső |
collection | PubMed |
description | A physical model of selective “ion binding” in the L-type calcium channel is constructed, and consequences of the model are compared with experimental data. This reduced model treats only ions and the carboxylate oxygens of the EEEE locus explicitly and restricts interactions to hard-core repulsion and ion–ion and ion–dielectric electrostatic forces. The structural atoms provide a flexible environment for passing cations, thus resulting in a self-organized induced-fit model of the selectivity filter. Experimental conditions involving binary mixtures of alkali and/or alkaline earth metal ions are computed using equilibrium Monte Carlo simulations in the grand canonical ensemble. The model pore rejects alkali metal ions in the presence of biological concentrations of Ca(2+) and predicts the blockade of alkali metal ion currents by micromolar Ca(2+). Conductance patterns observed in varied mixtures containing Na(+) and Li(+), or Ba(2+) and Ca(2+), are predicted. Ca(2+) is substantially more potent in blocking Na(+) current than Ba(2+). In apparent contrast to experiments using buffered Ca(2+) solutions, the predicted potency of Ca(2+) in blocking alkali metal ion currents depends on the species and concentration of the alkali metal ion, as is expected if these ions compete with Ca(2+) for the pore. These experiments depend on the problematic estimation of Ca(2+) activity in solutions buffered for Ca(2+) and pH in a varying background of bulk salt. Simulations of Ca(2+) distribution with the model pore bathed in solutions containing a varied amount of Li(+) reveal a “barrier and well” pattern. The entry/exit barrier for Ca(2+) is strongly modulated by the Li(+) concentration of the bath, suggesting a physical explanation for observed kinetic phenomena. Our simulations show that the selectivity of L-type calcium channels can arise from an interplay of electrostatic and hard-core repulsion forces among ions and a few crucial channel atoms. The reduced system selects for the cation that delivers the largest charge in the smallest ion volume. |
format | Text |
id | pubmed-2712969 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | The Rockefeller University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-27129692009-11-01 Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion Boda, Dezső Valiskó, Mónika Henderson, Douglas Eisenberg, Bob Gillespie, Dirk Nonner, Wolfgang J Gen Physiol Article A physical model of selective “ion binding” in the L-type calcium channel is constructed, and consequences of the model are compared with experimental data. This reduced model treats only ions and the carboxylate oxygens of the EEEE locus explicitly and restricts interactions to hard-core repulsion and ion–ion and ion–dielectric electrostatic forces. The structural atoms provide a flexible environment for passing cations, thus resulting in a self-organized induced-fit model of the selectivity filter. Experimental conditions involving binary mixtures of alkali and/or alkaline earth metal ions are computed using equilibrium Monte Carlo simulations in the grand canonical ensemble. The model pore rejects alkali metal ions in the presence of biological concentrations of Ca(2+) and predicts the blockade of alkali metal ion currents by micromolar Ca(2+). Conductance patterns observed in varied mixtures containing Na(+) and Li(+), or Ba(2+) and Ca(2+), are predicted. Ca(2+) is substantially more potent in blocking Na(+) current than Ba(2+). In apparent contrast to experiments using buffered Ca(2+) solutions, the predicted potency of Ca(2+) in blocking alkali metal ion currents depends on the species and concentration of the alkali metal ion, as is expected if these ions compete with Ca(2+) for the pore. These experiments depend on the problematic estimation of Ca(2+) activity in solutions buffered for Ca(2+) and pH in a varying background of bulk salt. Simulations of Ca(2+) distribution with the model pore bathed in solutions containing a varied amount of Li(+) reveal a “barrier and well” pattern. The entry/exit barrier for Ca(2+) is strongly modulated by the Li(+) concentration of the bath, suggesting a physical explanation for observed kinetic phenomena. Our simulations show that the selectivity of L-type calcium channels can arise from an interplay of electrostatic and hard-core repulsion forces among ions and a few crucial channel atoms. The reduced system selects for the cation that delivers the largest charge in the smallest ion volume. The Rockefeller University Press 2009-05 /pmc/articles/PMC2712969/ /pubmed/19398776 http://dx.doi.org/10.1085/jgp.200910211 Text en © 2009 Boda et al. This article is distributed under the terms of an Attribution–Noncommercial–Share Alike–No Mirror Sites license for the first six months after the publication date (see http://www.jgp.org/misc/terms.shtml). After six months it is available under a Creative Commons License (Attribution–Noncommercial–Share Alike 3.0 Unported license, as described at http://creativecommons.org/licenses/by-nc-sa/3.0/). |
spellingShingle | Article Boda, Dezső Valiskó, Mónika Henderson, Douglas Eisenberg, Bob Gillespie, Dirk Nonner, Wolfgang Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion |
title | Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion |
title_full | Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion |
title_fullStr | Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion |
title_full_unstemmed | Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion |
title_short | Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion |
title_sort | ionic selectivity in l-type calcium channels by electrostatics and hard-core repulsion |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2712969/ https://www.ncbi.nlm.nih.gov/pubmed/19398776 http://dx.doi.org/10.1085/jgp.200910211 |
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