Efficient stochastic simulation of reaction–diffusion processes via direct compilation

We present the Stochastic Simulator Compiler (SSC), a tool for exact stochastic simulations of well-mixed and spatially heterogeneous systems. SSC is the first tool to allow a readable high-level description with spatially heterogeneous simulation algorithms and complex geometries; this permits larg...

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Detalles Bibliográficos
Autores principales: Lis, Mieszko, Artyomov, Maxim N., Devadas, Srinivas, Chakraborty, Arup K.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2734316/
https://www.ncbi.nlm.nih.gov/pubmed/19578038
http://dx.doi.org/10.1093/bioinformatics/btp387

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2734316/
https://www.ncbi.nlm.nih.gov/pubmed/19578038
http://dx.doi.org/10.1093/bioinformatics/btp387

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