MOODS: fast search for position weight matrix matches in DNA sequences

Summary: MOODS (MOtif Occurrence Detection Suite) is a software package for matching position weight matrices against DNA sequences. MOODS implements state-of-the-art online matching algorithms, achieving considerably faster scanning speed than with a simple brute-force search. MOODS is written in C...

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Detalles Bibliográficos
Autores principales: Korhonen, Janne, Martinmäki, Petri, Pizzi, Cinzia, Rastas, Pasi, Ukkonen, Esko
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2778336/
https://www.ncbi.nlm.nih.gov/pubmed/19773334
http://dx.doi.org/10.1093/bioinformatics/btp554

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2778336/
https://www.ncbi.nlm.nih.gov/pubmed/19773334
http://dx.doi.org/10.1093/bioinformatics/btp554

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