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The oligonucleotide frequency derived error gradient and its application to the binning of metagenome fragments

BACKGROUND: The characterisation, or binning, of metagenome fragments is an important first step to further downstream analysis of microbial consortia. Here, we propose a one-dimensional signature, OFDEG, derived from the oligonucleotide frequency profile of a DNA sequence, and show that it is possi...

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Detalles Bibliográficos
Autores principales: Saeed, Isaam, Halgamuge, Saman K
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2788362/
https://www.ncbi.nlm.nih.gov/pubmed/19958473
http://dx.doi.org/10.1186/1471-2164-10-S3-S10