JANE: efficient mapping of prokaryotic ESTs and variable length sequence reads on related template genomes

BACKGROUND: ESTs or variable sequence reads can be available in prokaryotic studies well before a complete genome is known. Use cases include (i) transcriptome studies or (ii) single cell sequencing of bacteria. Without suitable software their further analysis and mapping would have to await finaliz...

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Detalles Bibliográficos
Autores principales: Liang, Chunguang, Schmid, Alexander, López-Sánchez, María José, Moya, Andres, Gross, Roy, Bernhardt, Jörg, Dandekar, Thomas
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2789075/
https://www.ncbi.nlm.nih.gov/pubmed/19943962
http://dx.doi.org/10.1186/1471-2105-10-391

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2789075/
https://www.ncbi.nlm.nih.gov/pubmed/19943962
http://dx.doi.org/10.1186/1471-2105-10-391

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