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A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells

BACKGROUND: The deposition of unconjugated bilirubin (UCB) in selected regions of the brain results in irreversible neuronal damage, or Bilirubin Encephalopathy (BE). Although UCB impairs a large number of cellular functions in other tissues, the basic mechanisms of neurotoxicity have not yet been f...

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Autores principales: Calligaris, Raffaella, Bellarosa, Cristina, Foti, Rossana, Roncaglia, Paola, Giraudi, Pablo, Krmac, Helena, Tiribelli, Claudio, Gustincich, Stefano
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2789749/
https://www.ncbi.nlm.nih.gov/pubmed/19925663
http://dx.doi.org/10.1186/1471-2164-10-543
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author Calligaris, Raffaella
Bellarosa, Cristina
Foti, Rossana
Roncaglia, Paola
Giraudi, Pablo
Krmac, Helena
Tiribelli, Claudio
Gustincich, Stefano
author_facet Calligaris, Raffaella
Bellarosa, Cristina
Foti, Rossana
Roncaglia, Paola
Giraudi, Pablo
Krmac, Helena
Tiribelli, Claudio
Gustincich, Stefano
author_sort Calligaris, Raffaella
collection PubMed
description BACKGROUND: The deposition of unconjugated bilirubin (UCB) in selected regions of the brain results in irreversible neuronal damage, or Bilirubin Encephalopathy (BE). Although UCB impairs a large number of cellular functions in other tissues, the basic mechanisms of neurotoxicity have not yet been fully clarified. While cells can accumulate UCB by passive diffusion, cell protection may involve multiple mechanisms including the extrusion of the pigment as well as pro-survival homeostatic responses that are still unknown. RESULTS: Transcriptome changes induced by UCB exposure in SH-SY5Y neuroblastoma cell line were examined by high density oligonucleotide microarrays. Two-hundred and thirty genes were induced after 24 hours. A Gene Ontology (GO) analysis showed that at least 50 genes were directly involved in the endoplasmic reticulum (ER) stress response. Validation of selected ER stress genes is shown by quantitative RT-PCR. Analysis of XBP1 splicing and DDIT3/CHOP subcellular localization is presented. CONCLUSION: These results show for the first time that UCB exposure induces ER stress response as major intracellular homeostasis in surviving neuroblastoma cells in vitro.
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spelling pubmed-27897492009-12-08 A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells Calligaris, Raffaella Bellarosa, Cristina Foti, Rossana Roncaglia, Paola Giraudi, Pablo Krmac, Helena Tiribelli, Claudio Gustincich, Stefano BMC Genomics Research article BACKGROUND: The deposition of unconjugated bilirubin (UCB) in selected regions of the brain results in irreversible neuronal damage, or Bilirubin Encephalopathy (BE). Although UCB impairs a large number of cellular functions in other tissues, the basic mechanisms of neurotoxicity have not yet been fully clarified. While cells can accumulate UCB by passive diffusion, cell protection may involve multiple mechanisms including the extrusion of the pigment as well as pro-survival homeostatic responses that are still unknown. RESULTS: Transcriptome changes induced by UCB exposure in SH-SY5Y neuroblastoma cell line were examined by high density oligonucleotide microarrays. Two-hundred and thirty genes were induced after 24 hours. A Gene Ontology (GO) analysis showed that at least 50 genes were directly involved in the endoplasmic reticulum (ER) stress response. Validation of selected ER stress genes is shown by quantitative RT-PCR. Analysis of XBP1 splicing and DDIT3/CHOP subcellular localization is presented. CONCLUSION: These results show for the first time that UCB exposure induces ER stress response as major intracellular homeostasis in surviving neuroblastoma cells in vitro. BioMed Central 2009-11-19 /pmc/articles/PMC2789749/ /pubmed/19925663 http://dx.doi.org/10.1186/1471-2164-10-543 Text en Copyright ©2009 Calligaris et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research article
Calligaris, Raffaella
Bellarosa, Cristina
Foti, Rossana
Roncaglia, Paola
Giraudi, Pablo
Krmac, Helena
Tiribelli, Claudio
Gustincich, Stefano
A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells
title A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells
title_full A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells
title_fullStr A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells
title_full_unstemmed A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells
title_short A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells
title_sort transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma sh-sy5y cells
topic Research article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2789749/
https://www.ncbi.nlm.nih.gov/pubmed/19925663
http://dx.doi.org/10.1186/1471-2164-10-543
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