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Application of the PM6 semi-empirical method to modeling proteins enhances docking accuracy of AutoDock

BACKGROUND: Molecular docking methods are commonly used for predicting binding modes and energies of ligands to proteins. For accurate complex geometry and binding energy estimation, an appropriate method for calculating partial charges is essential. AutoDockTools software, the interface for prepari...

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Detalles Bibliográficos
Autores principales: Bikadi, Zsolt, Hazai, Eszter
Formato: Texto
Lenguaje:English
Publicado: Springer 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2820493/
https://www.ncbi.nlm.nih.gov/pubmed/20150996
http://dx.doi.org/10.1186/1758-2946-1-15