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Predicting conserved protein motifs with Sub-HMMs

BACKGROUND: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is the difficulty to pinpoint their much shorter functional sub-features, such as catalytically relevant sequence motifs in en...

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Detalles Bibliográficos
Autores principales: Horan, Kevin, Shelton, Christian R, Girke, Thomas
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2879284/
https://www.ncbi.nlm.nih.gov/pubmed/20420695
http://dx.doi.org/10.1186/1471-2105-11-205