SVDetect: a tool to identify genomic structural variations from paired-end and mate-pair sequencing data

Summary: We present SVDetect, a program designed to identify genomic structural variations from paired-end and mate-pair next-generation sequencing data produced by the Illumina GA and ABI SOLiD platforms. Applying both sliding-window and clustering strategies, we use anomalously mapped read pairs p...

Descripción completa

Detalles Bibliográficos
Autores principales: Zeitouni, Bruno, Boeva, Valentina, Janoueix-Lerosey, Isabelle, Loeillet, Sophie, Legoix-né, Patricia, Nicolas, Alain, Delattre, Olivier, Barillot, Emmanuel
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2905550/
https://www.ncbi.nlm.nih.gov/pubmed/20639544
http://dx.doi.org/10.1093/bioinformatics/btq293

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2905550/
https://www.ncbi.nlm.nih.gov/pubmed/20639544
http://dx.doi.org/10.1093/bioinformatics/btq293

Ejemplares similares