Cloud-Coffee: implementation of a parallel consistency-based multiple alignment algorithm in the T-Coffee package and its benchmarking on the Amazon Elastic-Cloud

Summary: We present the first parallel implementation of the T-Coffee consistency-based multiple aligner. We benchmark it on the Amazon Elastic Cloud (EC2) and show that the parallelization procedure is reasonably effective. We also conclude that for a web server with moderate usage (10K hits/month)...

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Detalles Bibliográficos
Autores principales: Di Tommaso, Paolo, Orobitg, Miquel, Guirado, Fernando, Cores, Fernado, Espinosa, Toni, Notredame, Cedric
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2905555/
https://www.ncbi.nlm.nih.gov/pubmed/20605929
http://dx.doi.org/10.1093/bioinformatics/btq304

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2905555/
https://www.ncbi.nlm.nih.gov/pubmed/20605929
http://dx.doi.org/10.1093/bioinformatics/btq304

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