Cargando…
How Can Hydrophobic Association Be Enthalpy Driven?
Hydrophobic association is often recognized as being driven by favorable entropic contributions. Here, using explicit solvent molecular dynamics simulations we investigate binding in a model hydrophobic receptor−ligand system which appears, instead, to be driven by enthalpy and opposed by entropy. W...
Autores principales: | , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2010
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2938831/ https://www.ncbi.nlm.nih.gov/pubmed/20844599 http://dx.doi.org/10.1021/ct1003077 |
_version_ | 1782186682241515520 |
---|---|
author | Setny, Piotr Baron, Riccardo McCammon, J. Andrew |
author_facet | Setny, Piotr Baron, Riccardo McCammon, J. Andrew |
author_sort | Setny, Piotr |
collection | PubMed |
description | Hydrophobic association is often recognized as being driven by favorable entropic contributions. Here, using explicit solvent molecular dynamics simulations we investigate binding in a model hydrophobic receptor−ligand system which appears, instead, to be driven by enthalpy and opposed by entropy. We use the temperature dependence of the potential of mean force to analyze the thermodynamic contributions along the association coordinate. Relating such contributions to the ongoing changes in system hydration allows us to demonstrate that the overall binding thermodynamics is determined by the expulsion of disorganized water from the receptor cavity. Our model study sheds light on the solvent-induced driving forces for receptor−ligand association of general, transferable relevance for biological systems with poorly hydrated binding sites. |
format | Text |
id | pubmed-2938831 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-29388312010-09-14 How Can Hydrophobic Association Be Enthalpy Driven? Setny, Piotr Baron, Riccardo McCammon, J. Andrew J Chem Theory Comput Hydrophobic association is often recognized as being driven by favorable entropic contributions. Here, using explicit solvent molecular dynamics simulations we investigate binding in a model hydrophobic receptor−ligand system which appears, instead, to be driven by enthalpy and opposed by entropy. We use the temperature dependence of the potential of mean force to analyze the thermodynamic contributions along the association coordinate. Relating such contributions to the ongoing changes in system hydration allows us to demonstrate that the overall binding thermodynamics is determined by the expulsion of disorganized water from the receptor cavity. Our model study sheds light on the solvent-induced driving forces for receptor−ligand association of general, transferable relevance for biological systems with poorly hydrated binding sites. American Chemical Society 2010-08-24 2010-09-14 /pmc/articles/PMC2938831/ /pubmed/20844599 http://dx.doi.org/10.1021/ct1003077 Text en Copyright © 2010 American Chemical Society http://pubs.acs.org This is an open-access article distributed under the ACS AuthorChoice Terms & Conditions. Any use of this article, must conform to the terms of that license which are available at http://pubs.acs.org. |
spellingShingle | Setny, Piotr Baron, Riccardo McCammon, J. Andrew How Can Hydrophobic Association Be Enthalpy Driven? |
title | How Can Hydrophobic Association Be Enthalpy Driven? |
title_full | How Can Hydrophobic Association Be Enthalpy Driven? |
title_fullStr | How Can Hydrophobic Association Be Enthalpy Driven? |
title_full_unstemmed | How Can Hydrophobic Association Be Enthalpy Driven? |
title_short | How Can Hydrophobic Association Be Enthalpy Driven? |
title_sort | how can hydrophobic association be enthalpy driven? |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2938831/ https://www.ncbi.nlm.nih.gov/pubmed/20844599 http://dx.doi.org/10.1021/ct1003077 |
work_keys_str_mv | AT setnypiotr howcanhydrophobicassociationbeenthalpydriven AT baronriccardo howcanhydrophobicassociationbeenthalpydriven AT mccammonjandrew howcanhydrophobicassociationbeenthalpydriven |