Cargando…
Characterisation of Muta™Mouse λgt10-lacZ transgene: evidence for in vivo rearrangements
The multicopy λgt10-lacZ transgene shuttle vector of Muta™Mouse serves as an important tool for genotoxicity studies. Here, we describe a model for λgt10-lacZ transgene molecular structure, based on characterisation of transgenes recovered from animals of our intramural breeding colony. Unique nucle...
Autores principales: | , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2010
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2966988/ https://www.ncbi.nlm.nih.gov/pubmed/20724577 http://dx.doi.org/10.1093/mutage/geq048 |
_version_ | 1782189627290943488 |
---|---|
author | Shwed, Philip S. Crosthwait, Jennifer Douglas, George R. Seligy, Vern L. |
author_facet | Shwed, Philip S. Crosthwait, Jennifer Douglas, George R. Seligy, Vern L. |
author_sort | Shwed, Philip S. |
collection | PubMed |
description | The multicopy λgt10-lacZ transgene shuttle vector of Muta™Mouse serves as an important tool for genotoxicity studies. Here, we describe a model for λgt10-lacZ transgene molecular structure, based on characterisation of transgenes recovered from animals of our intramural breeding colony. Unique nucleotide sequences of the 47 513 bp monomer are reported with GenBank® assigned accession numbers. Besides defining ancestral mutations of the λgt10 used to construct the transgene and the Muta™Mouse precursor (strain 40.6), we validated the sequence integrity of key λ genes needed for the Escherichia coli host-based mutation reporting assay. Using three polymerase chain reaction (PCR)-based chromosome scanning and cloning strategies, we found five distinct in vivo transgene rearrangements, which were common to both sexes, and involved copy fusions generating ∼10 defective copies per haplotype. The transgene haplotype was estimated by Southern hybridisation and real-time–polymerase chain reaction, which yielded 29.0 ± 4.0 copies based on spleen DNA of Muta™Mouse, and a reconstructed CD2F(1) genome with variable λgt10-lacZ copies. Similar analysis of commercially prepared spleen DNA from Big Blue® mouse yielded a haplotype of 23.5 ± 3.1 copies. The latter DNA is used in calibrating a commercial in vitro packaging kit for E.coli host-based mutation assays of both transgenic systems. The model for λgt10-lacZ transgene organisation, and the PCR-based methods for assessing copy number, integrity and rearrangements, potentially extends the use of Muta™Mouse construct for direct, genomic-type assays that detect the effects of clastogens and aneugens, without depending on an E.coli host, for reporting effects. |
format | Text |
id | pubmed-2966988 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-29669882010-11-02 Characterisation of Muta™Mouse λgt10-lacZ transgene: evidence for in vivo rearrangements Shwed, Philip S. Crosthwait, Jennifer Douglas, George R. Seligy, Vern L. Mutagenesis Original Articles The multicopy λgt10-lacZ transgene shuttle vector of Muta™Mouse serves as an important tool for genotoxicity studies. Here, we describe a model for λgt10-lacZ transgene molecular structure, based on characterisation of transgenes recovered from animals of our intramural breeding colony. Unique nucleotide sequences of the 47 513 bp monomer are reported with GenBank® assigned accession numbers. Besides defining ancestral mutations of the λgt10 used to construct the transgene and the Muta™Mouse precursor (strain 40.6), we validated the sequence integrity of key λ genes needed for the Escherichia coli host-based mutation reporting assay. Using three polymerase chain reaction (PCR)-based chromosome scanning and cloning strategies, we found five distinct in vivo transgene rearrangements, which were common to both sexes, and involved copy fusions generating ∼10 defective copies per haplotype. The transgene haplotype was estimated by Southern hybridisation and real-time–polymerase chain reaction, which yielded 29.0 ± 4.0 copies based on spleen DNA of Muta™Mouse, and a reconstructed CD2F(1) genome with variable λgt10-lacZ copies. Similar analysis of commercially prepared spleen DNA from Big Blue® mouse yielded a haplotype of 23.5 ± 3.1 copies. The latter DNA is used in calibrating a commercial in vitro packaging kit for E.coli host-based mutation assays of both transgenic systems. The model for λgt10-lacZ transgene organisation, and the PCR-based methods for assessing copy number, integrity and rearrangements, potentially extends the use of Muta™Mouse construct for direct, genomic-type assays that detect the effects of clastogens and aneugens, without depending on an E.coli host, for reporting effects. Oxford University Press 2010-11 2010-08-19 /pmc/articles/PMC2966988/ /pubmed/20724577 http://dx.doi.org/10.1093/mutage/geq048 Text en © Her Majesty the Queen in Right of Canada, 2010. Published by Oxford University Press on behalf of the UK Environmental Mutagen Society. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Shwed, Philip S. Crosthwait, Jennifer Douglas, George R. Seligy, Vern L. Characterisation of Muta™Mouse λgt10-lacZ transgene: evidence for in vivo rearrangements |
title | Characterisation of Muta™Mouse λgt10-lacZ transgene: evidence for in vivo rearrangements |
title_full | Characterisation of Muta™Mouse λgt10-lacZ transgene: evidence for in vivo rearrangements |
title_fullStr | Characterisation of Muta™Mouse λgt10-lacZ transgene: evidence for in vivo rearrangements |
title_full_unstemmed | Characterisation of Muta™Mouse λgt10-lacZ transgene: evidence for in vivo rearrangements |
title_short | Characterisation of Muta™Mouse λgt10-lacZ transgene: evidence for in vivo rearrangements |
title_sort | characterisation of muta™mouse λgt10-lacz transgene: evidence for in vivo rearrangements |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2966988/ https://www.ncbi.nlm.nih.gov/pubmed/20724577 http://dx.doi.org/10.1093/mutage/geq048 |
work_keys_str_mv | AT shwedphilips characterisationofmutamouselgt10lacztransgeneevidenceforinvivorearrangements AT crosthwaitjennifer characterisationofmutamouselgt10lacztransgeneevidenceforinvivorearrangements AT douglasgeorger characterisationofmutamouselgt10lacztransgeneevidenceforinvivorearrangements AT seligyvernl characterisationofmutamouselgt10lacztransgeneevidenceforinvivorearrangements |