Cargando…
Sampling the conformation of protein surface residues for flexible protein docking
BACKGROUND: The problem of determining the physical conformation of a protein dimer, given the structures of the two interacting proteins in their unbound state, is a difficult one. The location of the docking interface is determined largely by geometric complementarity, but finding complementary ge...
Autores principales: | Francis-Lyon, Patricia, Gu, Shengyin, Hass, Joel, Amenta, Nina, Koehl, Patrice |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2010
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3002368/ https://www.ncbi.nlm.nih.gov/pubmed/21092317 http://dx.doi.org/10.1186/1471-2105-11-575 |
Ejemplares similares
-
How round is a protein? Exploring protein structures for globularity using conformal mapping
por: Hass, Joel, et al.
Publicado: (2014) -
Enhanced sampling of protein conformational states for dynamic cross‐docking within the protein‐protein docking server SwarmDock
por: Torchala, Mieczyslaw, et al.
Publicado: (2019) -
Effect of conformation sampling strategies in genetic algorithm for multiple protein docking
por: Esquivel-Rodríguez, Juan, et al.
Publicado: (2012) -
The incorporation of protein flexibility and conformational energy penalties in docking screens to improve ligand discovery
por: Fischer, Marcus, et al.
Publicado: (2014) -
Pre‐ and post‐docking sampling of conformational changes using ClustENM and HADDOCK for protein‐protein and protein‐DNA systems
por: Kurkcuoglu, Zeynep, et al.
Publicado: (2019)