ABMapper: a suffix array-based tool for multi-location searching and splice-junction mapping

Summary: Sequencing reads generated by RNA-sequencing (RNA-seq) must first be mapped back to the genome through alignment before they can be further analyzed. Current fast and memory-saving short-read mappers could give us a quick view of the transcriptome. However, they are neither designed for rea...

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Detalles Bibliográficos
Autores principales: Lou, Shao-Ke, Ni, Bing, Lo, Leung-Yau, Tsui, Stephen Kwok-Wing, Chan, Ting-Fung, Leung, Kwong-Sak
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3031031/
https://www.ncbi.nlm.nih.gov/pubmed/21169377
http://dx.doi.org/10.1093/bioinformatics/btq656

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3031031/
https://www.ncbi.nlm.nih.gov/pubmed/21169377
http://dx.doi.org/10.1093/bioinformatics/btq656

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