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ReadDepth: A Parallel R Package for Detecting Copy Number Alterations from Short Sequencing Reads

Copy number alterations are important contributors to many genetic diseases, including cancer. We present the readDepth package for R, which can detect these aberrations by measuring the depth of coverage obtained by massively parallel sequencing of the genome. In addition to achieving higher accura...

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Detalles Bibliográficos
Autores principales: Miller, Christopher A., Hampton, Oliver, Coarfa, Cristian, Milosavljevic, Aleksandar
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3031566/
https://www.ncbi.nlm.nih.gov/pubmed/21305028
http://dx.doi.org/10.1371/journal.pone.0016327