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Complete genome sequence of Actinosynnema mirum type strain (101(T))
Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino-synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo-nocardineae. A. mirum is characterized by its motil...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2009
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035213/ https://www.ncbi.nlm.nih.gov/pubmed/21304636 http://dx.doi.org/10.4056/sigs.21137 |
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author | Land, Miriam Lapidus, Alla Mayilraj, Shanmugam Chen, Feng Copeland, Alex Del Rio, Tijana Glavina Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Chertkov, Olga Bruce, David Goodwin, Lynne Pitluck, Sam Rohde, Manfred Göker, Markus Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia C. Brettin, Thomas Detter, John C. Han, Cliff Chain, Patrick Tindall, Brian J. Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter |
author_facet | Land, Miriam Lapidus, Alla Mayilraj, Shanmugam Chen, Feng Copeland, Alex Del Rio, Tijana Glavina Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Chertkov, Olga Bruce, David Goodwin, Lynne Pitluck, Sam Rohde, Manfred Göker, Markus Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia C. Brettin, Thomas Detter, John C. Han, Cliff Chain, Patrick Tindall, Brian J. Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter |
author_sort | Land, Miriam |
collection | PubMed |
description | Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino-synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo-nocardineae. A. mirum is characterized by its motile spores borne on synnemata and as a producer of nocardicin antibiotics. It is capable of growing aerobically and under a moderate CO(2) atmosphere. The strain is a Gram-positive, aerial and substrate mycelium producing bacterium, originally isolated from a grass blade collected from the Raritan River, New Jersey. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Actinosynnemataceae, and only the second sequence from the actinobacterial suborder Pseudonocardineae. The 8,248,144 bp long single replicon genome with its 7100 protein-coding and 77 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035213 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352132011-02-08 Complete genome sequence of Actinosynnema mirum type strain (101(T)) Land, Miriam Lapidus, Alla Mayilraj, Shanmugam Chen, Feng Copeland, Alex Del Rio, Tijana Glavina Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Chertkov, Olga Bruce, David Goodwin, Lynne Pitluck, Sam Rohde, Manfred Göker, Markus Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia C. Brettin, Thomas Detter, John C. Han, Cliff Chain, Patrick Tindall, Brian J. Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino-synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo-nocardineae. A. mirum is characterized by its motile spores borne on synnemata and as a producer of nocardicin antibiotics. It is capable of growing aerobically and under a moderate CO(2) atmosphere. The strain is a Gram-positive, aerial and substrate mycelium producing bacterium, originally isolated from a grass blade collected from the Raritan River, New Jersey. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Actinosynnemataceae, and only the second sequence from the actinobacterial suborder Pseudonocardineae. The 8,248,144 bp long single replicon genome with its 7100 protein-coding and 77 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-07-20 /pmc/articles/PMC3035213/ /pubmed/21304636 http://dx.doi.org/10.4056/sigs.21137 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Land, Miriam Lapidus, Alla Mayilraj, Shanmugam Chen, Feng Copeland, Alex Del Rio, Tijana Glavina Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Chertkov, Olga Bruce, David Goodwin, Lynne Pitluck, Sam Rohde, Manfred Göker, Markus Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia C. Brettin, Thomas Detter, John C. Han, Cliff Chain, Patrick Tindall, Brian J. Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Complete genome sequence of Actinosynnema mirum type strain (101(T)) |
title | Complete genome sequence of Actinosynnema mirum type strain (101(T)) |
title_full | Complete genome sequence of Actinosynnema mirum type strain (101(T)) |
title_fullStr | Complete genome sequence of Actinosynnema mirum type strain (101(T)) |
title_full_unstemmed | Complete genome sequence of Actinosynnema mirum type strain (101(T)) |
title_short | Complete genome sequence of Actinosynnema mirum type strain (101(T)) |
title_sort | complete genome sequence of actinosynnema mirum type strain (101(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035213/ https://www.ncbi.nlm.nih.gov/pubmed/21304636 http://dx.doi.org/10.4056/sigs.21137 |
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