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Complete genome sequence of Actinosynnema mirum type strain (101(T))

Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino-synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo-nocardineae. A. mirum is characterized by its motil...

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Autores principales: Land, Miriam, Lapidus, Alla, Mayilraj, Shanmugam, Chen, Feng, Copeland, Alex, Del Rio, Tijana Glavina, Nolan, Matt, Lucas, Susan, Tice, Hope, Cheng, Jan-Fang, Chertkov, Olga, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Rohde, Manfred, Göker, Markus, Pati, Amrita, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia C., Brettin, Thomas, Detter, John C., Han, Cliff, Chain, Patrick, Tindall, Brian J., Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035213/
https://www.ncbi.nlm.nih.gov/pubmed/21304636
http://dx.doi.org/10.4056/sigs.21137
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author Land, Miriam
Lapidus, Alla
Mayilraj, Shanmugam
Chen, Feng
Copeland, Alex
Del Rio, Tijana Glavina
Nolan, Matt
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Chertkov, Olga
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Rohde, Manfred
Göker, Markus
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia C.
Brettin, Thomas
Detter, John C.
Han, Cliff
Chain, Patrick
Tindall, Brian J.
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_facet Land, Miriam
Lapidus, Alla
Mayilraj, Shanmugam
Chen, Feng
Copeland, Alex
Del Rio, Tijana Glavina
Nolan, Matt
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Chertkov, Olga
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Rohde, Manfred
Göker, Markus
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia C.
Brettin, Thomas
Detter, John C.
Han, Cliff
Chain, Patrick
Tindall, Brian J.
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_sort Land, Miriam
collection PubMed
description Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino-synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo-nocardineae. A. mirum is characterized by its motile spores borne on synnemata and as a producer of nocardicin antibiotics. It is capable of growing aerobically and under a moderate CO(2) atmosphere. The strain is a Gram-positive, aerial and substrate mycelium producing bacterium, originally isolated from a grass blade collected from the Raritan River, New Jersey. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Actinosynnemataceae, and only the second sequence from the actinobacterial suborder Pseudonocardineae. The 8,248,144 bp long single replicon genome with its 7100 protein-coding and 77 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352132011-02-08 Complete genome sequence of Actinosynnema mirum type strain (101(T)) Land, Miriam Lapidus, Alla Mayilraj, Shanmugam Chen, Feng Copeland, Alex Del Rio, Tijana Glavina Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Chertkov, Olga Bruce, David Goodwin, Lynne Pitluck, Sam Rohde, Manfred Göker, Markus Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia C. Brettin, Thomas Detter, John C. Han, Cliff Chain, Patrick Tindall, Brian J. Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino-synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo-nocardineae. A. mirum is characterized by its motile spores borne on synnemata and as a producer of nocardicin antibiotics. It is capable of growing aerobically and under a moderate CO(2) atmosphere. The strain is a Gram-positive, aerial and substrate mycelium producing bacterium, originally isolated from a grass blade collected from the Raritan River, New Jersey. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Actinosynnemataceae, and only the second sequence from the actinobacterial suborder Pseudonocardineae. The 8,248,144 bp long single replicon genome with its 7100 protein-coding and 77 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-07-20 /pmc/articles/PMC3035213/ /pubmed/21304636 http://dx.doi.org/10.4056/sigs.21137 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Land, Miriam
Lapidus, Alla
Mayilraj, Shanmugam
Chen, Feng
Copeland, Alex
Del Rio, Tijana Glavina
Nolan, Matt
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Chertkov, Olga
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Rohde, Manfred
Göker, Markus
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia C.
Brettin, Thomas
Detter, John C.
Han, Cliff
Chain, Patrick
Tindall, Brian J.
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Complete genome sequence of Actinosynnema mirum type strain (101(T))
title Complete genome sequence of Actinosynnema mirum type strain (101(T))
title_full Complete genome sequence of Actinosynnema mirum type strain (101(T))
title_fullStr Complete genome sequence of Actinosynnema mirum type strain (101(T))
title_full_unstemmed Complete genome sequence of Actinosynnema mirum type strain (101(T))
title_short Complete genome sequence of Actinosynnema mirum type strain (101(T))
title_sort complete genome sequence of actinosynnema mirum type strain (101(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035213/
https://www.ncbi.nlm.nih.gov/pubmed/21304636
http://dx.doi.org/10.4056/sigs.21137
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