Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T))

Geodermatophilus obscurus Luedemann 1968 is the type species of the genus, which is the type genus of the family Geodermatophilaceae. G. obscurus is of interest as it has frequently been isolated from stressful environments such as rock varnish in deserts, and as it exhibits interesting phenotypes s...

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Autores principales: Ivanova, Natalia, Sikorski, Johannes, Jando, Marlen, Munk, Christine, Lapidus, Alla, Glavina Del Rio, Tijana, Copeland, Alex, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Nolan, Matt, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Meincke, Linda, Brettin, Thomas, Detter, John C., Rohde, Manfred, Göker, Markus, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035280/
https://www.ncbi.nlm.nih.gov/pubmed/21304698
http://dx.doi.org/10.4056/sigs.711311
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author Ivanova, Natalia
Sikorski, Johannes
Jando, Marlen
Munk, Christine
Lapidus, Alla
Glavina Del Rio, Tijana
Copeland, Alex
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Nolan, Matt
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Mavromatis, Konstantinos
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Meincke, Linda
Brettin, Thomas
Detter, John C.
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_facet Ivanova, Natalia
Sikorski, Johannes
Jando, Marlen
Munk, Christine
Lapidus, Alla
Glavina Del Rio, Tijana
Copeland, Alex
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Nolan, Matt
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Mavromatis, Konstantinos
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Meincke, Linda
Brettin, Thomas
Detter, John C.
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_sort Ivanova, Natalia
collection PubMed
description Geodermatophilus obscurus Luedemann 1968 is the type species of the genus, which is the type genus of the family Geodermatophilaceae. G. obscurus is of interest as it has frequently been isolated from stressful environments such as rock varnish in deserts, and as it exhibits interesting phenotypes such as lytic capability of yeast cell walls, UV-C resistance, strong production of extracellular functional amyloid (FuBA) and manganese oxidation. This is the first completed genome sequence of the family Geodermatophilaceae. The 5,322,497 bp long genome with its 5,161 protein-coding and 58 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352802011-02-08 Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T)) Ivanova, Natalia Sikorski, Johannes Jando, Marlen Munk, Christine Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Meincke, Linda Brettin, Thomas Detter, John C. Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Geodermatophilus obscurus Luedemann 1968 is the type species of the genus, which is the type genus of the family Geodermatophilaceae. G. obscurus is of interest as it has frequently been isolated from stressful environments such as rock varnish in deserts, and as it exhibits interesting phenotypes such as lytic capability of yeast cell walls, UV-C resistance, strong production of extracellular functional amyloid (FuBA) and manganese oxidation. This is the first completed genome sequence of the family Geodermatophilaceae. The 5,322,497 bp long genome with its 5,161 protein-coding and 58 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-03-30 /pmc/articles/PMC3035280/ /pubmed/21304698 http://dx.doi.org/10.4056/sigs.711311 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Ivanova, Natalia
Sikorski, Johannes
Jando, Marlen
Munk, Christine
Lapidus, Alla
Glavina Del Rio, Tijana
Copeland, Alex
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Nolan, Matt
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Mavromatis, Konstantinos
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Meincke, Linda
Brettin, Thomas
Detter, John C.
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T))
title Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T))
title_full Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T))
title_fullStr Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T))
title_full_unstemmed Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T))
title_short Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T))
title_sort complete genome sequence of geodermatophilus obscurus type strain (g-20(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035280/
https://www.ncbi.nlm.nih.gov/pubmed/21304698
http://dx.doi.org/10.4056/sigs.711311
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