Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T))
Geodermatophilus obscurus Luedemann 1968 is the type species of the genus, which is the type genus of the family Geodermatophilaceae. G. obscurus is of interest as it has frequently been isolated from stressful environments such as rock varnish in deserts, and as it exhibits interesting phenotypes s...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035280/ https://www.ncbi.nlm.nih.gov/pubmed/21304698 http://dx.doi.org/10.4056/sigs.711311 |
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author | Ivanova, Natalia Sikorski, Johannes Jando, Marlen Munk, Christine Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Meincke, Linda Brettin, Thomas Detter, John C. Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter |
author_facet | Ivanova, Natalia Sikorski, Johannes Jando, Marlen Munk, Christine Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Meincke, Linda Brettin, Thomas Detter, John C. Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter |
author_sort | Ivanova, Natalia |
collection | PubMed |
description | Geodermatophilus obscurus Luedemann 1968 is the type species of the genus, which is the type genus of the family Geodermatophilaceae. G. obscurus is of interest as it has frequently been isolated from stressful environments such as rock varnish in deserts, and as it exhibits interesting phenotypes such as lytic capability of yeast cell walls, UV-C resistance, strong production of extracellular functional amyloid (FuBA) and manganese oxidation. This is the first completed genome sequence of the family Geodermatophilaceae. The 5,322,497 bp long genome with its 5,161 protein-coding and 58 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035280 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352802011-02-08 Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T)) Ivanova, Natalia Sikorski, Johannes Jando, Marlen Munk, Christine Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Meincke, Linda Brettin, Thomas Detter, John C. Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Geodermatophilus obscurus Luedemann 1968 is the type species of the genus, which is the type genus of the family Geodermatophilaceae. G. obscurus is of interest as it has frequently been isolated from stressful environments such as rock varnish in deserts, and as it exhibits interesting phenotypes such as lytic capability of yeast cell walls, UV-C resistance, strong production of extracellular functional amyloid (FuBA) and manganese oxidation. This is the first completed genome sequence of the family Geodermatophilaceae. The 5,322,497 bp long genome with its 5,161 protein-coding and 58 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-03-30 /pmc/articles/PMC3035280/ /pubmed/21304698 http://dx.doi.org/10.4056/sigs.711311 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Ivanova, Natalia Sikorski, Johannes Jando, Marlen Munk, Christine Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Meincke, Linda Brettin, Thomas Detter, John C. Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T)) |
title | Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T)) |
title_full | Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T)) |
title_fullStr | Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T)) |
title_full_unstemmed | Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T)) |
title_short | Complete genome sequence of Geodermatophilus obscurus type strain (G-20(T)) |
title_sort | complete genome sequence of geodermatophilus obscurus type strain (g-20(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035280/ https://www.ncbi.nlm.nih.gov/pubmed/21304698 http://dx.doi.org/10.4056/sigs.711311 |
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