WordCluster: detecting clusters of DNA words and genomic elements

BACKGROUND: Many k-mers (or DNA words) and genomic elements are known to be spatially clustered in the genome. Well established examples are the genes, TFBSs, CpG dinucleotides, microRNA genes and ultra-conserved non-coding regions. Currently, no algorithm exists to find these clusters in a statisti...

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Detalles Bibliográficos
Autores principales: Hackenberg, Michael, Carpena, Pedro, Bernaola-Galván, Pedro, Barturen, Guillermo, Alganza, Ángel M, Oliver, José L
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Software Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3037320/
https://www.ncbi.nlm.nih.gov/pubmed/21261981
http://dx.doi.org/10.1186/1748-7188-6-2

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3037320/
https://www.ncbi.nlm.nih.gov/pubmed/21261981
http://dx.doi.org/10.1186/1748-7188-6-2

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