DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI

BACKGROUND: Next-generation sequencing technologies have led to the high-throughput production of sequence data (reads) at low cost. However, these reads are significantly shorter and more error-prone than conventional Sanger shotgun reads. This poses a challenge for the de novo assembly in terms of...

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Detalles Bibliográficos
Autores principales: Liu, Yongchao, Schmidt, Bertil, Maskell, Douglas L
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3072957/
https://www.ncbi.nlm.nih.gov/pubmed/21447171
http://dx.doi.org/10.1186/1471-2105-12-85

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3072957/
https://www.ncbi.nlm.nih.gov/pubmed/21447171
http://dx.doi.org/10.1186/1471-2105-12-85

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