Context-driven discovery of gene cassettes in mobile integrons using a computational grammar

BACKGROUND: Gene discovery algorithms typically examine sequence data for low level patterns. A novel method to computationally discover higher order DNA structures is presented, using a context sensitive grammar. The algorithm was applied to the discovery of gene cassettes associated with integrons...

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Detalles Bibliográficos
Autores principales: Tsafnat, Guy, Coiera, Enrico, Partridge, Sally R, Schaeffer, Jaron, Iredell, Jon R
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3087341/
https://www.ncbi.nlm.nih.gov/pubmed/19735578
http://dx.doi.org/10.1186/1471-2105-10-281

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3087341/
https://www.ncbi.nlm.nih.gov/pubmed/19735578
http://dx.doi.org/10.1186/1471-2105-10-281

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