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Dhx34 and Nbas function in the NMD pathway and are required for embryonic development in zebrafish

The nonsense-mediated mRNA decay (NMD) pathway is a highly conserved surveillance mechanism that is present in all eukaryotes. It prevents the synthesis of truncated proteins by selectively degrading mRNAs harbouring premature termination codons (PTCs). The core NMD effectors were originally identif...

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Autores principales: Anastasaki, Corina, Longman, Dasa, Capper, Amy, Patton, E. Elizabeth, Cáceres, Javier F.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3089463/
https://www.ncbi.nlm.nih.gov/pubmed/21227923
http://dx.doi.org/10.1093/nar/gkq1319
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author Anastasaki, Corina
Longman, Dasa
Capper, Amy
Patton, E. Elizabeth
Cáceres, Javier F.
author_facet Anastasaki, Corina
Longman, Dasa
Capper, Amy
Patton, E. Elizabeth
Cáceres, Javier F.
author_sort Anastasaki, Corina
collection PubMed
description The nonsense-mediated mRNA decay (NMD) pathway is a highly conserved surveillance mechanism that is present in all eukaryotes. It prevents the synthesis of truncated proteins by selectively degrading mRNAs harbouring premature termination codons (PTCs). The core NMD effectors were originally identified in genetic screens in Saccharomyces cerevisae and in the nematode Caenorhabditis elegans, and subsequently by homology searches in other metazoans. A genome-wide RNAi screen in C. elegans resulted in the identification of two novel NMD genes that are essential for proper embryonic development. Their human orthologues, DHX34 and NAG/NBAS, are required for NMD in human cells. Here, we find that the zebrafish genome encodes orthologues of DHX34 and NAG/NBAS. We show that the morpholino-induced depletion of zebrafish Dhx34 and Nbas proteins results in severe developmental defects and reduced embryonic viability. We also found that Dhx34 and Nbas are required for degradation of PTC-containing mRNAs in zebrafish embryos. The phenotypes observed in both Dhx34 and Nbas morphants are similar to defects in Upf1, Smg-5- or Smg-6- depleted embryos, suggesting that these factors affect the same pathway and confirming that zebrafish embryogenesis requires an active NMD pathway.
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spelling pubmed-30894632011-05-09 Dhx34 and Nbas function in the NMD pathway and are required for embryonic development in zebrafish Anastasaki, Corina Longman, Dasa Capper, Amy Patton, E. Elizabeth Cáceres, Javier F. Nucleic Acids Res Molecular Biology The nonsense-mediated mRNA decay (NMD) pathway is a highly conserved surveillance mechanism that is present in all eukaryotes. It prevents the synthesis of truncated proteins by selectively degrading mRNAs harbouring premature termination codons (PTCs). The core NMD effectors were originally identified in genetic screens in Saccharomyces cerevisae and in the nematode Caenorhabditis elegans, and subsequently by homology searches in other metazoans. A genome-wide RNAi screen in C. elegans resulted in the identification of two novel NMD genes that are essential for proper embryonic development. Their human orthologues, DHX34 and NAG/NBAS, are required for NMD in human cells. Here, we find that the zebrafish genome encodes orthologues of DHX34 and NAG/NBAS. We show that the morpholino-induced depletion of zebrafish Dhx34 and Nbas proteins results in severe developmental defects and reduced embryonic viability. We also found that Dhx34 and Nbas are required for degradation of PTC-containing mRNAs in zebrafish embryos. The phenotypes observed in both Dhx34 and Nbas morphants are similar to defects in Upf1, Smg-5- or Smg-6- depleted embryos, suggesting that these factors affect the same pathway and confirming that zebrafish embryogenesis requires an active NMD pathway. Oxford University Press 2011-05 2011-01-10 /pmc/articles/PMC3089463/ /pubmed/21227923 http://dx.doi.org/10.1093/nar/gkq1319 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Molecular Biology
Anastasaki, Corina
Longman, Dasa
Capper, Amy
Patton, E. Elizabeth
Cáceres, Javier F.
Dhx34 and Nbas function in the NMD pathway and are required for embryonic development in zebrafish
title Dhx34 and Nbas function in the NMD pathway and are required for embryonic development in zebrafish
title_full Dhx34 and Nbas function in the NMD pathway and are required for embryonic development in zebrafish
title_fullStr Dhx34 and Nbas function in the NMD pathway and are required for embryonic development in zebrafish
title_full_unstemmed Dhx34 and Nbas function in the NMD pathway and are required for embryonic development in zebrafish
title_short Dhx34 and Nbas function in the NMD pathway and are required for embryonic development in zebrafish
title_sort dhx34 and nbas function in the nmd pathway and are required for embryonic development in zebrafish
topic Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3089463/
https://www.ncbi.nlm.nih.gov/pubmed/21227923
http://dx.doi.org/10.1093/nar/gkq1319
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