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MLTreeMap - accurate Maximum Likelihood placement of environmental DNA sequences into taxonomic and functional reference phylogenies

BACKGROUND: Shotgun sequencing of environmental DNA is an essential technique for characterizing uncultivated microbes in situ. However, the taxonomic and functional assignment of the obtained sequence fragments remains a pressing problem. RESULTS: Existing algorithms are largely optimized for speed...

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Detalles Bibliográficos
Autores principales:	Stark, Manuel, Berger, Simon A, Stamatakis, Alexandros, von Mering, Christian
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2010
Materias:	Methodology Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3091657/ https://www.ncbi.nlm.nih.gov/pubmed/20687950 http://dx.doi.org/10.1186/1471-2164-11-461

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