Cargando…
(5′S)-8,5′-Cyclo-2′-deoxyguanosine Is a Strong Block to Replication, a Potent pol V-Dependent Mutagenic Lesion, and Is Inefficiently Repaired in Escherichia coli
[Image: see text] 8,5′-Cyclopurines, making up an important class of ionizing radiation-induced tandem DNA damage, are repaired only by nucleotide excision repair (NER). They accumulate in NER-impaired cells, as in Cockayne syndrome group B and certain Xeroderma Pigmentosum patients. A plasmid conta...
Autores principales: | , , , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2011
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3092667/ https://www.ncbi.nlm.nih.gov/pubmed/21491964 http://dx.doi.org/10.1021/bi2004944 |
_version_ | 1782203392985137152 |
---|---|
author | Jasti, Vijay P. Das, Rajat S. Hilton, Benjamin A. Weerasooriya, Savithri Zou, Yue Basu, Ashis K. |
author_facet | Jasti, Vijay P. Das, Rajat S. Hilton, Benjamin A. Weerasooriya, Savithri Zou, Yue Basu, Ashis K. |
author_sort | Jasti, Vijay P. |
collection | PubMed |
description | [Image: see text] 8,5′-Cyclopurines, making up an important class of ionizing radiation-induced tandem DNA damage, are repaired only by nucleotide excision repair (NER). They accumulate in NER-impaired cells, as in Cockayne syndrome group B and certain Xeroderma Pigmentosum patients. A plasmid containing (5′S)-8,5′-cyclo-2′-deoxyguanosine (S-cdG) was replicated in Escherichia coli with specific DNA polymerase knockouts. Viability was <1% in the wild-type strain, which increased to 5.5% with SOS. Viability decreased further in a pol II(–) strain, whereas it increased considerably in a pol IV(–) strain. Remarkably, no progeny was recovered from a pol V(–) strain, indicating that pol V is absolutely required for bypassing S-cdG. Progeny analyses indicated that S-cdG is significantly mutagenic, inducing ∼34% mutation with SOS. Most mutations were S-cdG → A mutations, though S-cdG → T mutation and deletion of 5′C also occurred. Incisions of purified UvrABC nuclease on S-cdG, S-cdA, and C8-dG-AP on a duplex 51-mer showed that the incision rates are C8-dG-AP > S-cdA > S-cdG. In summary, S-cdG is a major block to DNA replication, highly mutagenic, and repaired slowly in E. coli. |
format | Text |
id | pubmed-3092667 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-30926672011-05-11 (5′S)-8,5′-Cyclo-2′-deoxyguanosine Is a Strong Block to Replication, a Potent pol V-Dependent Mutagenic Lesion, and Is Inefficiently Repaired in Escherichia coli Jasti, Vijay P. Das, Rajat S. Hilton, Benjamin A. Weerasooriya, Savithri Zou, Yue Basu, Ashis K. Biochemistry [Image: see text] 8,5′-Cyclopurines, making up an important class of ionizing radiation-induced tandem DNA damage, are repaired only by nucleotide excision repair (NER). They accumulate in NER-impaired cells, as in Cockayne syndrome group B and certain Xeroderma Pigmentosum patients. A plasmid containing (5′S)-8,5′-cyclo-2′-deoxyguanosine (S-cdG) was replicated in Escherichia coli with specific DNA polymerase knockouts. Viability was <1% in the wild-type strain, which increased to 5.5% with SOS. Viability decreased further in a pol II(–) strain, whereas it increased considerably in a pol IV(–) strain. Remarkably, no progeny was recovered from a pol V(–) strain, indicating that pol V is absolutely required for bypassing S-cdG. Progeny analyses indicated that S-cdG is significantly mutagenic, inducing ∼34% mutation with SOS. Most mutations were S-cdG → A mutations, though S-cdG → T mutation and deletion of 5′C also occurred. Incisions of purified UvrABC nuclease on S-cdG, S-cdA, and C8-dG-AP on a duplex 51-mer showed that the incision rates are C8-dG-AP > S-cdA > S-cdG. In summary, S-cdG is a major block to DNA replication, highly mutagenic, and repaired slowly in E. coli. American Chemical Society 2011-04-15 2011-05-17 /pmc/articles/PMC3092667/ /pubmed/21491964 http://dx.doi.org/10.1021/bi2004944 Text en Copyright © 2011 American Chemical Society http://pubs.acs.org This is an open-access article distributed under the ACS AuthorChoice Terms & Conditions. Any use of this article, must conform to the terms of that license which are available at http://pubs.acs.org. |
spellingShingle | Jasti, Vijay P. Das, Rajat S. Hilton, Benjamin A. Weerasooriya, Savithri Zou, Yue Basu, Ashis K. (5′S)-8,5′-Cyclo-2′-deoxyguanosine Is a Strong Block to Replication, a Potent pol V-Dependent Mutagenic Lesion, and Is Inefficiently Repaired in Escherichia coli |
title | (5′S)-8,5′-Cyclo-2′-deoxyguanosine Is a Strong Block to Replication, a Potent pol V-Dependent Mutagenic Lesion, and Is Inefficiently Repaired in Escherichia coli |
title_full | (5′S)-8,5′-Cyclo-2′-deoxyguanosine Is a Strong Block to Replication, a Potent pol V-Dependent Mutagenic Lesion, and Is Inefficiently Repaired in Escherichia coli |
title_fullStr | (5′S)-8,5′-Cyclo-2′-deoxyguanosine Is a Strong Block to Replication, a Potent pol V-Dependent Mutagenic Lesion, and Is Inefficiently Repaired in Escherichia coli |
title_full_unstemmed | (5′S)-8,5′-Cyclo-2′-deoxyguanosine Is a Strong Block to Replication, a Potent pol V-Dependent Mutagenic Lesion, and Is Inefficiently Repaired in Escherichia coli |
title_short | (5′S)-8,5′-Cyclo-2′-deoxyguanosine Is a Strong Block to Replication, a Potent pol V-Dependent Mutagenic Lesion, and Is Inefficiently Repaired in Escherichia coli |
title_sort | (5′s)-8,5′-cyclo-2′-deoxyguanosine is a strong block to replication, a potent pol v-dependent mutagenic lesion, and is inefficiently repaired in escherichia coli |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3092667/ https://www.ncbi.nlm.nih.gov/pubmed/21491964 http://dx.doi.org/10.1021/bi2004944 |
work_keys_str_mv | AT jastivijayp 5s85cyclo2deoxyguanosineisastrongblocktoreplicationapotentpolvdependentmutageniclesionandisinefficientlyrepairedinescherichiacoli AT dasrajats 5s85cyclo2deoxyguanosineisastrongblocktoreplicationapotentpolvdependentmutageniclesionandisinefficientlyrepairedinescherichiacoli AT hiltonbenjamina 5s85cyclo2deoxyguanosineisastrongblocktoreplicationapotentpolvdependentmutageniclesionandisinefficientlyrepairedinescherichiacoli AT weerasooriyasavithri 5s85cyclo2deoxyguanosineisastrongblocktoreplicationapotentpolvdependentmutageniclesionandisinefficientlyrepairedinescherichiacoli AT zouyue 5s85cyclo2deoxyguanosineisastrongblocktoreplicationapotentpolvdependentmutageniclesionandisinefficientlyrepairedinescherichiacoli AT basuashisk 5s85cyclo2deoxyguanosineisastrongblocktoreplicationapotentpolvdependentmutageniclesionandisinefficientlyrepairedinescherichiacoli |