FR-HIT, a very fast program to recruit metagenomic reads to homologous reference genomes

Summary: Fragment recruitment, a process of aligning sequencing reads to reference genomes, is a crucial step in metagenomic data analysis. The available sequence alignment programs are either slow or insufficient for recruiting metagenomic reads. We implemented an efficient algorithm, FR-HIT, for f...

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Detalles Bibliográficos
Autores principales: Niu, Beifang, Zhu, Zhengwei, Fu, Limin, Wu, Sitao, Li, Weizhong
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3106194/
https://www.ncbi.nlm.nih.gov/pubmed/21505035
http://dx.doi.org/10.1093/bioinformatics/btr252

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3106194/
https://www.ncbi.nlm.nih.gov/pubmed/21505035
http://dx.doi.org/10.1093/bioinformatics/btr252

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