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Revisiting gap locations in amino acid sequence alignments and a proposal for a method to improve them by introducing solvent accessibility
In comparative modeling, the quality of amino acid sequence alignment still constitutes a major bottleneck in the generation of high quality models of protein three-dimensional (3D) structures. Substantial efforts have been made to improve alignment quality by revising the substitution matrix, intro...
Autores principales: | Hijikata, Atsushi, Yura, Kei, Noguti, Tosiyuki, Go, Mitiko |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wiley Subscription Services, Inc., A Wiley Company
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3110861/ https://www.ncbi.nlm.nih.gov/pubmed/21465562 http://dx.doi.org/10.1002/prot.23011 |
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