Cargando…

Statistical Quantification of Methylation Levels by Next-Generation Sequencing

BACKGROUND/AIMS: Recently, next-generation sequencing-based technologies have enabled DNA methylation profiling at high resolution and low cost. Methyl-Seq and Reduced Representation Bisulfite Sequencing (RRBS) are two such technologies that interrogate methylation levels at CpG sites throughout the...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wu, Guodong, Yi, Nengjun, Absher, Devin, Zhi, Degui
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2011
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3115964/ https://www.ncbi.nlm.nih.gov/pubmed/21698242 http://dx.doi.org/10.1371/journal.pone.0021034

Ejemplares similares

Statistics for Next Generation Sequencing – Meeting Report
por: Wu, Hao, et al.
Publicado: (2012)

Comparison of DNA Quantification Methods for Next Generation Sequencing
por: Robin, Jérôme D., et al.
Publicado: (2016)

Hierarchical Generalized Linear Models for Multiple Groups of Rare and Common Variants: Jointly Estimating Group and Individual-Variant Effects
por: Yi, Nengjun, et al.
Publicado: (2011)

Statistical analysis of next generation sequencing data
por: Datta, Somnath, et al.
Publicado: (2014)

The Statistics of Bulk Segregant Analysis Using Next Generation Sequencing
por: Magwene, Paul M., et al.
Publicado: (2011)

Statistical guidelines for quality control of next-generation sequencing techniques
por: Sprang, Maximilian, et al.
Publicado: (2021)

IQSeq: Integrated Isoform Quantification Analysis Based on Next-Generation Sequencing
por: Du, Jiang, et al.
Publicado: (2012)

BAMscale: quantification of next-generation sequencing peaks and generation of scaled coverage tracks
por: Pongor, Lorinc S., et al.
Publicado: (2020)

Detection and quantification of mitochondrial DNA deletions from next-generation sequence data
por: Bosworth, Colleen M., et al.
Publicado: (2017)

The Application of Next Generation Sequencing in DNA Methylation Analysis
por: Zhang, Yingying, et al.
Publicado: (2010)

Targeted DNA Methylation Analysis by Next-generation Sequencing
por: Masser, Dustin R., et al.
Publicado: (2015)

An Optimal Bahadur-Efficient Method in Detection of Sparse Signals with Applications to Pathway Analysis in Sequencing Association Studies
por: Dai, Hongying, et al.
Publicado: (2016)

Statistical Guidance for Experimental Design and Data Analysis of Mutation Detection in Rare Monogenic Mendelian Diseases by Exome Sequencing
por: Zhi, Degui, et al.
Publicado: (2012)

Lipid changes due to fenofibrate treatment are not associated with changes in DNA methylation patterns in the GOLDN study
por: Das, Mithun, et al.
Publicado: (2015)

Identification of key genes by integrating DNA methylation and next-generation transcriptome sequencing for esophageal squamous cell carcinoma
por: Chen, Yang, et al.
Publicado: (2020)

Targeted Sequencing of Large Genomic Regions with CATCH-Seq
por: Day, Kenneth, et al.
Publicado: (2014)

SUN-031 Quantification of Pooled Libraries for Optimizing Cluster Density in Next Generation Sequencing
por: Narcizo, Amanda, et al.
Publicado: (2019)

SNVer: a statistical tool for variant calling in analysis of pooled or individual next-generation sequencing data
por: Wei, Zhi, et al.
Publicado: (2011)

Absolute quantification of viable bacteria abundances in food by next-generation sequencing: Quantitative NGS of viable microbes
por: Kallastu, Aili, et al.
Publicado: (2023)

Manatee: detection and quantification of small non-coding RNAs from next-generation sequencing data
por: Handzlik, Joanna E., et al.
Publicado: (2020)

nQuire: a statistical framework for ploidy estimation using next generation sequencing
por: Weiß, Clemens L., et al.
Publicado: (2018)

Next-Generation Sequencing Technologies and Neurogenetic Diseases
por: Sun, Hui, et al.
Publicado: (2021)

Next-Generation Sequencing
por: Xiong, Momiao, et al.
Publicado: (2010)

Next-generation sequencing
por: Reis-Filho, Jorge S
Publicado: (2009)

Next-generation sequencing methylation profiling of subjects with obesity identifies novel gene changes
por: Day, Samantha E., et al.
Publicado: (2016)

Next generation sequencing of extraskeletal myxoid chondrosarcoma
por: Davis, Elizabeth J., et al.
Publicado: (2017)

Heritable DNA Methylation in CD4(+) Cells among Complex Families Displays Genetic and Non-Genetic Effects
por: Day, Kenneth, et al.
Publicado: (2016)

What is next generation sequencing?
por: Behjati, Sam, et al.
Publicado: (2013)

Next generation sequencing technologies for next generation plant breeding
por: Ray, Soham, et al.
Publicado: (2014)

NGSNGS: next-generation simulator for next-generation sequencing data
por: Henriksen, Rasmus Amund, et al.
Publicado: (2023)

Evaluation of nine statistics to identify QTLs in bulk segregant analysis using next generation sequencing approaches
por: de la Fuente Cantó, Carla, et al.
Publicado: (2022)

Short Barcodes for Next Generation Sequencing
por: Mir, Katharina, et al.
Publicado: (2013)

High density methylation QTL analysis in human blood via next-generation sequencing of the methylated genomic DNA fraction
por: McClay, Joseph L., et al.
Publicado: (2015)

Estimating breast tissue-specific DNA methylation age using next-generation sequencing data
por: Castle, James R., et al.
Publicado: (2020)

Methylation-capture and Next-Generation Sequencing of free circulating DNA from human plasma
por: Warton, Kristina, et al.
Publicado: (2014)

dCATCH-Seq: improved sequencing of large continuous genomic targets with double-hybridization
por: Zhang, Yanfeng, et al.
Publicado: (2017)

Accelerating next generation sequencing data analysis with system level optimizations
por: Kathiresan, Nagarajan, et al.
Publicado: (2017)

Effect of bacterial DNA enrichment on detection and quantification of bacteria in an infected tissue model by metagenomic next-generation sequencing
por: Lazarevic, Vladimir, et al.
Publicado: (2022)

Next generation sequencing in cytology
por: Pisapia, Pasquale, et al.
Publicado: (2021)

Next-generation sequencing in dermatology
por: King, Andrew D., et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_lh1na3mpm564nm5ehnrdqmloov