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Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
BACKGROUND: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest approach to parallelisation with SIMD technology has previously been described by Farrar in 2007. The aim of this study was...
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
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BioMed Central
2011
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3120707/ https://www.ncbi.nlm.nih.gov/pubmed/21631914 http://dx.doi.org/10.1186/1471-2105-12-221 |