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A graphical method for practical and informative identifiability analyses of physiological models: A case study of insulin kinetics and sensitivity

BACKGROUND: Derivative based a-priori structural identifiability analyses of mathematical models can offer valuable insight into the identifiability of model parameters. However, these analyses are only capable of a binary confirmation of the mathematical distinction of parameters and a positive out...

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Detalles Bibliográficos
Autores principales: Docherty, Paul D, Chase, J Geoffrey, Lotz, Thomas F, Desaive, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3129319/
https://www.ncbi.nlm.nih.gov/pubmed/21615928
http://dx.doi.org/10.1186/1475-925X-10-39
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author Docherty, Paul D
Chase, J Geoffrey
Lotz, Thomas F
Desaive, Thomas
author_facet Docherty, Paul D
Chase, J Geoffrey
Lotz, Thomas F
Desaive, Thomas
author_sort Docherty, Paul D
collection PubMed
description BACKGROUND: Derivative based a-priori structural identifiability analyses of mathematical models can offer valuable insight into the identifiability of model parameters. However, these analyses are only capable of a binary confirmation of the mathematical distinction of parameters and a positive outcome can begin to lose relevance when measurement error is introduced. This article presents an integral based method that allows the observation of the identifiability of models with two-parameters in the presence of assay error. METHODS: The method measures the distinction of the integral formulations of the parameter coefficients at the proposed sampling times. It can thus predict the susceptibility of the parameters to the effects of measurement error. The method is tested in-silico with Monte Carlo analyses of a number of insulin sensitivity test applications. RESULTS: The method successfully captured the analogous nature of identifiability observed in Monte Carlo analyses of a number of cases including protocol alterations, parameter changes and differences in participant behaviour. However, due to the numerical nature of the analyses, prediction was not perfect in all cases. CONCLUSIONS: Thus although the current method has valuable and significant capabilities in terms of study or test protocol design, additional developments would further strengthen the predictive capability of the method. Finally, the method captures the experimental reality that sampling error and timing can negate assumed parameter identifiability and that identifiability is a continuous rather than discrete phenomenon.
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spelling pubmed-31293192011-07-05 A graphical method for practical and informative identifiability analyses of physiological models: A case study of insulin kinetics and sensitivity Docherty, Paul D Chase, J Geoffrey Lotz, Thomas F Desaive, Thomas Biomed Eng Online Research BACKGROUND: Derivative based a-priori structural identifiability analyses of mathematical models can offer valuable insight into the identifiability of model parameters. However, these analyses are only capable of a binary confirmation of the mathematical distinction of parameters and a positive outcome can begin to lose relevance when measurement error is introduced. This article presents an integral based method that allows the observation of the identifiability of models with two-parameters in the presence of assay error. METHODS: The method measures the distinction of the integral formulations of the parameter coefficients at the proposed sampling times. It can thus predict the susceptibility of the parameters to the effects of measurement error. The method is tested in-silico with Monte Carlo analyses of a number of insulin sensitivity test applications. RESULTS: The method successfully captured the analogous nature of identifiability observed in Monte Carlo analyses of a number of cases including protocol alterations, parameter changes and differences in participant behaviour. However, due to the numerical nature of the analyses, prediction was not perfect in all cases. CONCLUSIONS: Thus although the current method has valuable and significant capabilities in terms of study or test protocol design, additional developments would further strengthen the predictive capability of the method. Finally, the method captures the experimental reality that sampling error and timing can negate assumed parameter identifiability and that identifiability is a continuous rather than discrete phenomenon. BioMed Central 2011-05-26 /pmc/articles/PMC3129319/ /pubmed/21615928 http://dx.doi.org/10.1186/1475-925X-10-39 Text en Copyright ©2011 Docherty et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Docherty, Paul D
Chase, J Geoffrey
Lotz, Thomas F
Desaive, Thomas
A graphical method for practical and informative identifiability analyses of physiological models: A case study of insulin kinetics and sensitivity
title A graphical method for practical and informative identifiability analyses of physiological models: A case study of insulin kinetics and sensitivity
title_full A graphical method for practical and informative identifiability analyses of physiological models: A case study of insulin kinetics and sensitivity
title_fullStr A graphical method for practical and informative identifiability analyses of physiological models: A case study of insulin kinetics and sensitivity
title_full_unstemmed A graphical method for practical and informative identifiability analyses of physiological models: A case study of insulin kinetics and sensitivity
title_short A graphical method for practical and informative identifiability analyses of physiological models: A case study of insulin kinetics and sensitivity
title_sort graphical method for practical and informative identifiability analyses of physiological models: a case study of insulin kinetics and sensitivity
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3129319/
https://www.ncbi.nlm.nih.gov/pubmed/21615928
http://dx.doi.org/10.1186/1475-925X-10-39
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