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Runs of Homozygosity Do Not Influence Survival to Old Age
Runs of homozygosity (ROH) are extended tracts of adjacent homozygous single nucleotide polymorphisms (SNPs) that are more common in unrelated individuals than previously thought. It has been proposed that estimating ROH on a genome-wide level, by making use of the genome-wide single nucleotide poly...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3143169/ https://www.ncbi.nlm.nih.gov/pubmed/21799906 http://dx.doi.org/10.1371/journal.pone.0022580 |
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author | Kuningas, Maris McQuillan, Ruth Wilson, James F. Hofman, Albert van Duijn, Cornelia M. Uitterlinden, André G. Tiemeier, Henning |
author_facet | Kuningas, Maris McQuillan, Ruth Wilson, James F. Hofman, Albert van Duijn, Cornelia M. Uitterlinden, André G. Tiemeier, Henning |
author_sort | Kuningas, Maris |
collection | PubMed |
description | Runs of homozygosity (ROH) are extended tracts of adjacent homozygous single nucleotide polymorphisms (SNPs) that are more common in unrelated individuals than previously thought. It has been proposed that estimating ROH on a genome-wide level, by making use of the genome-wide single nucleotide polymorphism (SNP) data, will enable to indentify recessive variants underlying complex traits. Here, we examined ROH larger than 1.5 Mb individually and in combination for association with survival in 5974 participants of the Rotterdam Study. In addition, we assessed the role of overall homozygosity, expressed as a percentage of the autosomal genome that is in ROH longer than 1.5 Mb, on survival during a mean follow-up period of 12 years. None of these measures of homozygosity was associated with survival to old age. |
format | Online Article Text |
id | pubmed-3143169 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-31431692011-07-28 Runs of Homozygosity Do Not Influence Survival to Old Age Kuningas, Maris McQuillan, Ruth Wilson, James F. Hofman, Albert van Duijn, Cornelia M. Uitterlinden, André G. Tiemeier, Henning PLoS One Research Article Runs of homozygosity (ROH) are extended tracts of adjacent homozygous single nucleotide polymorphisms (SNPs) that are more common in unrelated individuals than previously thought. It has been proposed that estimating ROH on a genome-wide level, by making use of the genome-wide single nucleotide polymorphism (SNP) data, will enable to indentify recessive variants underlying complex traits. Here, we examined ROH larger than 1.5 Mb individually and in combination for association with survival in 5974 participants of the Rotterdam Study. In addition, we assessed the role of overall homozygosity, expressed as a percentage of the autosomal genome that is in ROH longer than 1.5 Mb, on survival during a mean follow-up period of 12 years. None of these measures of homozygosity was associated with survival to old age. Public Library of Science 2011-07-25 /pmc/articles/PMC3143169/ /pubmed/21799906 http://dx.doi.org/10.1371/journal.pone.0022580 Text en Kuningas et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Kuningas, Maris McQuillan, Ruth Wilson, James F. Hofman, Albert van Duijn, Cornelia M. Uitterlinden, André G. Tiemeier, Henning Runs of Homozygosity Do Not Influence Survival to Old Age |
title | Runs of Homozygosity Do Not Influence Survival to Old Age |
title_full | Runs of Homozygosity Do Not Influence Survival to Old Age |
title_fullStr | Runs of Homozygosity Do Not Influence Survival to Old Age |
title_full_unstemmed | Runs of Homozygosity Do Not Influence Survival to Old Age |
title_short | Runs of Homozygosity Do Not Influence Survival to Old Age |
title_sort | runs of homozygosity do not influence survival to old age |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3143169/ https://www.ncbi.nlm.nih.gov/pubmed/21799906 http://dx.doi.org/10.1371/journal.pone.0022580 |
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