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ESPRIT-Tree: hierarchical clustering analysis of millions of 16S rRNA pyrosequences in quasilinear computational time

Taxonomy-independent analysis plays an essential role in microbial community analysis. Hierarchical clustering is one of the most widely employed approaches to finding operational taxonomic units, the basis for many downstream analyses. Most existing algorithms have quadratic space and computational...

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Detalles Bibliográficos
Autores principales: Cai, Yunpeng, Sun, Yijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3152367/
https://www.ncbi.nlm.nih.gov/pubmed/21596775
http://dx.doi.org/10.1093/nar/gkr349