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A One-Step Miniprep for the Isolation of Plasmid DNA and Lambda Phage Particles

Plasmid DNA minipreps are fundamental techniques in molecular biology. Current plasmid DNA minipreps use alkali and the anionic detergent SDS in a three-solution format. In addition, alkali minipreps usually require additional column-based purification steps and cannot isolate other extra-chromosoma...

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Autores principales: Lezin, George, Kosaka, Yasuhiro, Yost, H. Joseph, Kuehn, Michael R., Brunelli, Luca
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3156146/
https://www.ncbi.nlm.nih.gov/pubmed/21858126
http://dx.doi.org/10.1371/journal.pone.0023457
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author Lezin, George
Kosaka, Yasuhiro
Yost, H. Joseph
Kuehn, Michael R.
Brunelli, Luca
author_facet Lezin, George
Kosaka, Yasuhiro
Yost, H. Joseph
Kuehn, Michael R.
Brunelli, Luca
author_sort Lezin, George
collection PubMed
description Plasmid DNA minipreps are fundamental techniques in molecular biology. Current plasmid DNA minipreps use alkali and the anionic detergent SDS in a three-solution format. In addition, alkali minipreps usually require additional column-based purification steps and cannot isolate other extra-chromosomal elements, such as bacteriophages. Non-ionic detergents (NIDs) have been used occasionally as components of multiple-solution plasmid DNA minipreps, but a one-step approach has not been developed. Here, we have established a one-tube, one-solution NID plasmid DNA miniprep, and we show that this approach also isolates bacteriophage lambda particles. NID minipreps are more time-efficient than alkali minipreps, and NID plasmid DNA performs better than alkali DNA in many downstream applications. In fact, NID crude lysate DNA is sufficiently pure to be used in digestion and sequencing reactions. Microscopic analysis showed that the NID procedure fragments E.coli cells into small protoplast-like components, which may, at least in part, explain the effectiveness of this approach. This work demonstrates that one-step NID minipreps are a robust method to generate high quality plasmid DNA, and NID approaches can also isolate bacteriophage lambda particles, outperforming current standard alkali-based minipreps.
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spelling pubmed-31561462011-08-19 A One-Step Miniprep for the Isolation of Plasmid DNA and Lambda Phage Particles Lezin, George Kosaka, Yasuhiro Yost, H. Joseph Kuehn, Michael R. Brunelli, Luca PLoS One Research Article Plasmid DNA minipreps are fundamental techniques in molecular biology. Current plasmid DNA minipreps use alkali and the anionic detergent SDS in a three-solution format. In addition, alkali minipreps usually require additional column-based purification steps and cannot isolate other extra-chromosomal elements, such as bacteriophages. Non-ionic detergents (NIDs) have been used occasionally as components of multiple-solution plasmid DNA minipreps, but a one-step approach has not been developed. Here, we have established a one-tube, one-solution NID plasmid DNA miniprep, and we show that this approach also isolates bacteriophage lambda particles. NID minipreps are more time-efficient than alkali minipreps, and NID plasmid DNA performs better than alkali DNA in many downstream applications. In fact, NID crude lysate DNA is sufficiently pure to be used in digestion and sequencing reactions. Microscopic analysis showed that the NID procedure fragments E.coli cells into small protoplast-like components, which may, at least in part, explain the effectiveness of this approach. This work demonstrates that one-step NID minipreps are a robust method to generate high quality plasmid DNA, and NID approaches can also isolate bacteriophage lambda particles, outperforming current standard alkali-based minipreps. Public Library of Science 2011-08-15 /pmc/articles/PMC3156146/ /pubmed/21858126 http://dx.doi.org/10.1371/journal.pone.0023457 Text en This is an open-access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
spellingShingle Research Article
Lezin, George
Kosaka, Yasuhiro
Yost, H. Joseph
Kuehn, Michael R.
Brunelli, Luca
A One-Step Miniprep for the Isolation of Plasmid DNA and Lambda Phage Particles
title A One-Step Miniprep for the Isolation of Plasmid DNA and Lambda Phage Particles
title_full A One-Step Miniprep for the Isolation of Plasmid DNA and Lambda Phage Particles
title_fullStr A One-Step Miniprep for the Isolation of Plasmid DNA and Lambda Phage Particles
title_full_unstemmed A One-Step Miniprep for the Isolation of Plasmid DNA and Lambda Phage Particles
title_short A One-Step Miniprep for the Isolation of Plasmid DNA and Lambda Phage Particles
title_sort one-step miniprep for the isolation of plasmid dna and lambda phage particles
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3156146/
https://www.ncbi.nlm.nih.gov/pubmed/21858126
http://dx.doi.org/10.1371/journal.pone.0023457
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