Cargando…
Efficient counting of k-mers in DNA sequences using a bloom filter
BACKGROUND: Counting k-mers (substrings of length k in DNA sequence data) is an essential component of many methods in bioinformatics, including for genome and transcriptome assembly, for metagenomic sequencing, and for error correction of sequence reads. Although simple in principle, counting k-mer...
| Autores principales: | , |
|---|---|
| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
BioMed Central
2011
|
| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3166945/ https://www.ncbi.nlm.nih.gov/pubmed/21831268 http://dx.doi.org/10.1186/1471-2105-12-333 |