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Classifying short genomic fragments from novel lineages using composition and homology

BACKGROUND: The assignment of taxonomic attributions to DNA fragments recovered directly from the environment is a vital step in metagenomic data analysis. Assignments can be made using rank-specific classifiers, which assign reads to taxonomic labels from a predetermined level such as named species...

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Detalles Bibliográficos
Autores principales: Parks, Donovan H, MacDonald, Norman J, Beiko, Robert G
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3173459/
https://www.ncbi.nlm.nih.gov/pubmed/21827705
http://dx.doi.org/10.1186/1471-2105-12-328