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JaPaFi: A Novel Program for the Identification of Highly Conserved DNA Sequences
We describe the use of Java Pattern Finder (JaPaFi) to identify short (<100 nt) highly conserved sequences in a series of poxvirus genomes. The algorithm utilizes pattern matching to identify approximate matches appearing at least once in each member of a set of genomes; a key feature is that the...
Autores principales: | Sadeque, Aliya, Barsky, Marina, Marass, Francesco, Kruczkiewicz, Peter, Upton, Chris |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Diversity Preservation International (MDPI)
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3185747/ https://www.ncbi.nlm.nih.gov/pubmed/21994712 http://dx.doi.org/10.3390/v2091867 |
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