Cargando…

Gas-phase purification enables accurate, large-scale, multiplexed proteome quantification with isobaric tagging

We describe a mass spectrometry method, QuantMode, which improves the accuracy of isobaric tag–based quantification by alleviating the pervasive problem of precursor interference—co-isolation of impurities—through gas-phase purification. QuantMode analysis of a yeast sample ‘contaminated’ with inter...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wenger, Craig D, Lee, M Violet, Hebert, Alexander S, McAlister, Graeme C, Phanstiel, Douglas H, Westphall, Michael S, Coon, Joshua J
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	2011
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3205195/ https://www.ncbi.nlm.nih.gov/pubmed/21963608 http://dx.doi.org/10.1038/nmeth.1716

Ejemplares similares

A Versatile Isobaric Tag Enables Proteome Quantification in Data-Dependent and Data-Independent Acquisition Modes
por: Tian, Xiaobo, et al.
Publicado: (2020)

Compositional Proteomics: Effects of Spatial Constraints on Protein Quantification Utilizing Isobaric Tags
por: O’Brien, Jonathon J., et al.
Publicado: (2017)

Selective Maleylation-Directed Isobaric Peptide Termini Labeling for Accurate Proteome Quantification
por: Tian, Xiaobo, et al.
Publicado: (2020)

QUANTITY: An Isobaric Tag for Quantitative Glycomics
por: Yang, Shuang, et al.
Publicado: (2015)

MultiNotch MS3 Enables Accurate, Sensitive, and Multiplexed Detection of Differential Expression across Cancer Cell Line Proteomes
por: McAlister, Graeme C., et al.
Publicado: (2014)

High-Resolution Enabled 12-Plex DiLeu Isobaric Tags for Quantitative Proteomics
por: Frost, Dustin C., et al.
Publicado: (2014)

Accurate quantification of lipid species affected by isobaric overlap in Fourier-transform mass spectrometry
por: Höring, Marcus, et al.
Publicado: (2021)

A Collision-Induced Dissociation Cleavable Isobaric Tag for Peptide Fragment Ion-Based Quantification in Proteomics
por: Tian, Xiaobo, et al.
Publicado: (2020)

The Isotopic Ac-IP Tag Enables Multiplexed Proteome Quantification in Data-Independent Acquisition Mode
por: Tian, Xiaobo, et al.
Publicado: (2021)

Proteome profiling of s-nitrosylated synaptosomal proteins by isobaric mass tags
por: Wijasa, Teodora Stella, et al.
Publicado: (2017)

In-depth proteome analysis of brain tissue from Ewsr1 knockout mouse by multiplexed isobaric tandem mass tag labeling
por: Jung, Jin Woo, et al.
Publicado: (2023)

Effects of phlorizin on diabetic retinopathy according to isobaric tags for relative and absolute quantification–based proteomics in db/db mice
por: Zhang, Shi-yang, et al.
Publicado: (2013)

Isobaric Labeling-Based Relative Quantification in Shotgun Proteomics
por: Rauniyar, Navin, et al.
Publicado: (2014)

Isobaric tags for relative and absolute quantification-based proteomic analysis of testis biopsies in rhesus monkeys treated with transient scrotal hyperthermia
por: Rao, Meng, et al.
Publicado: (2017)

Neutron-encoded mass signatures for multi-plexed proteome quantification
por: Hebert, Alexander S, et al.
Publicado: (2013)

The data of Isobaric tags for relative and absolute quantification-based proteomic analysis of defense responses triggered by the fungal pathogen Fusarium graminearum in wheat
por: Wang, Biao, et al.
Publicado: (2019)

Proteomic Profiling Change and Its Implies in the Early Mycosis Fungoides (MF) Using Isobaric Tags for Relative and Absolute Quantification (iTRAQ)
por: Zhu, Mengyan, et al.
Publicado: (2020)

SimPLIT: Simplified Sample Preparation for Large-Scale Isobaric Tagging Proteomics
por: Sialana, Fernando J., et al.
Publicado: (2022)

Label-free and isobaric tandem mass tag (TMT) multiplexed quantitative proteomic data of two contrasting rice cultivars exposed to drought stress and recovery
por: Wu, Yunqi, et al.
Publicado: (2018)

A Novel Isobaric (Gas-Less) Laparoscopic Surgery Device
por: Leahy, Patrick F.
Publicado: (2023)

Isobaric Tagging-Based Quantification for Proteomic Analysis: A Comparative Study of Spared and Affected Muscles from mdx Mice at the Early Phase of Dystrophy
por: Matsumura, Cintia Yuri, et al.
Publicado: (2013)

Isobaric Tags for Relative and Absolute Quantification-Based Proteomics Reveals Candidate Proteins of Fat Deposition in Chinese Indigenous Sheep With Morphologically Different Tails
por: Zhu, Caiye, et al.
Publicado: (2021)

Comparative Proteomic Analysis by Isobaric Tags for the Relative and Absolute Quantification Reveals the Responses of Tobacco (Nicotiana tabacum L.) Roots to Different Soil Types
por: Li, Jialiang, et al.
Publicado: (2022)

Capturing site-specific heterogeneity with large-scale N-glycoproteome analysis
por: Riley, Nicholas M., et al.
Publicado: (2019)

Quantification of Oligonucleotides Using Tandem Mass Spectrometry with Isobaric Internal Standards
por: Gawlig, Christopher, et al.
Publicado: (2023)

Combining Amine Metabolomics and Quantitative Proteomics of Cancer Cells Using Derivatization with Isobaric Tags
por: Murphy, J. Patrick, et al.
Publicado: (2014)

Acute Aortic Dissection Biomarkers Identified Using Isobaric Tags for Relative and Absolute Quantitation
por: Xiao, Ziya, et al.
Publicado: (2016)

Isobar width effects in the coupling of nucleon to isobar channels
por: González, P, et al.
Publicado: (1986)

Identification of Differentially Expressed Proteins in Serum of Obese Patients by Isobaric Tags for Relative and Absolute Quantification (iTRAQ)-Coupled 2D LC-MS
por: Zhang, Ying, et al.
Publicado: (2020)

Isobaric tags for relative and absolute quantification-based proteomic analysis of host-pathogen protein interactions in the midgut of Aedes albopictus during dengue virus infection
por: Wang, Jiatian, et al.
Publicado: (2022)

Validation of a multiplexed and targeted lipidomics assay for accurate quantification of lipidomes
por: Zhang, Nanyan Rena, et al.
Publicado: (2022)

MS3 eliminates ratio distortion in isobaric labeling-based multiplexed quantitative proteomics
por: Ting, Lily, et al.
Publicado: (2011)

A single amino acid Gly-tag enables metal-free protein purification
por: Purushottam, Landa, et al.
Publicado: (2020)

Interference-Free Proteome Quantification with MS/MS-based Isobaric Isotopologue Detection
por: Bamberger, Casimir, et al.
Publicado: (2014)

Custom 4-Plex DiLeu Isobaric Labels Enable Relative Quantification of Urinary Proteins in Men with Lower Urinary Tract Symptoms (LUTS)
por: Greer, Tyler, et al.
Publicado: (2015)

Comparison of two malaria multiplex immunoassays that enable quantification of malaria antigens
por: Jang, Ihn Kyung, et al.
Publicado: (2022)

Isobaric mass tagging and triple quadrupole mass spectrometry to determine lipid biomarker candidates for Alzheimer's disease
por: Tokuoka, Suzumi M., et al.
Publicado: (2019)

Proteomic Quantification and Site-Mapping of S-Nitrosylated Proteins Using Isobaric iodoTMT Reagents
por: Qu, Zhe, et al.
Publicado: (2014)

An isobar experiment for the ISR
por: O'Neill, G K, et al.
Publicado: (1969)

pyQms enables universal and accurate quantification of mass spectrometry data
por: Leufken, Johannes, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_nuq06j09djagc21ef55d8j3jnk