Cargando…
Visual Analytics of Surveillance Data on Foodborne Vibriosis, United States, 1973–2010
Foodborne illnesses caused by microbial and chemical contaminants in food are a substantial health burden worldwide. In 2007, human vibriosis (non-cholera Vibrio infections) became a notifiable disease in the United States. In addition, Vibrio species are among the 31 major known pathogens transmitt...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Libertas Academica
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3236002/ https://www.ncbi.nlm.nih.gov/pubmed/22174586 http://dx.doi.org/10.4137/EHI.S7806 |
_version_ | 1782218673078927360 |
---|---|
author | Sims, Jennifer N. Isokpehi, Raphael D. Cooper, Gabrielle A. Bass, Michael P. Brown, Shyretha D. St John, Alison L. Gulig, Paul A. Cohly, Hari H.P. |
author_facet | Sims, Jennifer N. Isokpehi, Raphael D. Cooper, Gabrielle A. Bass, Michael P. Brown, Shyretha D. St John, Alison L. Gulig, Paul A. Cohly, Hari H.P. |
author_sort | Sims, Jennifer N. |
collection | PubMed |
description | Foodborne illnesses caused by microbial and chemical contaminants in food are a substantial health burden worldwide. In 2007, human vibriosis (non-cholera Vibrio infections) became a notifiable disease in the United States. In addition, Vibrio species are among the 31 major known pathogens transmitted through food in the United States. Diverse surveillance systems for foodborne pathogens also track outbreaks, illnesses, hospitalization and deaths due to non-cholera vibrios. Considering the recognition of vibriosis as a notifiable disease in the United States and the availability of diverse surveillance systems, there is a need for the development of easily deployed visualization and analysis approaches that can combine diverse data sources in an interactive manner. Current efforts to address this need are still limited. Visual analytics is an iterative process conducted via visual interfaces that involves collecting information, data preprocessing, knowledge representation, interaction, and decision making. We have utilized public domain outbreak and surveillance data sources covering 1973 to 2010, as well as visual analytics software to demonstrate integrated and interactive visualizations of data on foodborne outbreaks and surveillance of Vibrio species. Through the data visualization, we were able to identify unique patterns and/or novel relationships within and across datasets regarding (i) causative agent; (ii) foodborne outbreaks and illness per state; (iii) location of infection; (iv) vehicle (food) of infection; (v) anatomical site of isolation of Vibrio species; (vi) patients and complications of vibriosis; (vii) incidence of laboratory-confirmed vibriosis and V. parahaemolyticus outbreaks. The additional use of emerging visual analytics approaches for interaction with data on vibriosis, including non-foodborne related disease, can guide disease control and prevention as well as ongoing outbreak investigations. |
format | Online Article Text |
id | pubmed-3236002 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Libertas Academica |
record_format | MEDLINE/PubMed |
spelling | pubmed-32360022011-12-15 Visual Analytics of Surveillance Data on Foodborne Vibriosis, United States, 1973–2010 Sims, Jennifer N. Isokpehi, Raphael D. Cooper, Gabrielle A. Bass, Michael P. Brown, Shyretha D. St John, Alison L. Gulig, Paul A. Cohly, Hari H.P. Environ Health Insights Original Research Foodborne illnesses caused by microbial and chemical contaminants in food are a substantial health burden worldwide. In 2007, human vibriosis (non-cholera Vibrio infections) became a notifiable disease in the United States. In addition, Vibrio species are among the 31 major known pathogens transmitted through food in the United States. Diverse surveillance systems for foodborne pathogens also track outbreaks, illnesses, hospitalization and deaths due to non-cholera vibrios. Considering the recognition of vibriosis as a notifiable disease in the United States and the availability of diverse surveillance systems, there is a need for the development of easily deployed visualization and analysis approaches that can combine diverse data sources in an interactive manner. Current efforts to address this need are still limited. Visual analytics is an iterative process conducted via visual interfaces that involves collecting information, data preprocessing, knowledge representation, interaction, and decision making. We have utilized public domain outbreak and surveillance data sources covering 1973 to 2010, as well as visual analytics software to demonstrate integrated and interactive visualizations of data on foodborne outbreaks and surveillance of Vibrio species. Through the data visualization, we were able to identify unique patterns and/or novel relationships within and across datasets regarding (i) causative agent; (ii) foodborne outbreaks and illness per state; (iii) location of infection; (iv) vehicle (food) of infection; (v) anatomical site of isolation of Vibrio species; (vi) patients and complications of vibriosis; (vii) incidence of laboratory-confirmed vibriosis and V. parahaemolyticus outbreaks. The additional use of emerging visual analytics approaches for interaction with data on vibriosis, including non-foodborne related disease, can guide disease control and prevention as well as ongoing outbreak investigations. Libertas Academica 2011-11-10 /pmc/articles/PMC3236002/ /pubmed/22174586 http://dx.doi.org/10.4137/EHI.S7806 Text en © the author(s), publisher and licensee Libertas Academica Ltd. This is an open access article. Unrestricted non-commercial use is permitted provided the original work is properly cited. |
spellingShingle | Original Research Sims, Jennifer N. Isokpehi, Raphael D. Cooper, Gabrielle A. Bass, Michael P. Brown, Shyretha D. St John, Alison L. Gulig, Paul A. Cohly, Hari H.P. Visual Analytics of Surveillance Data on Foodborne Vibriosis, United States, 1973–2010 |
title | Visual Analytics of Surveillance Data on Foodborne Vibriosis, United States, 1973–2010 |
title_full | Visual Analytics of Surveillance Data on Foodborne Vibriosis, United States, 1973–2010 |
title_fullStr | Visual Analytics of Surveillance Data on Foodborne Vibriosis, United States, 1973–2010 |
title_full_unstemmed | Visual Analytics of Surveillance Data on Foodborne Vibriosis, United States, 1973–2010 |
title_short | Visual Analytics of Surveillance Data on Foodborne Vibriosis, United States, 1973–2010 |
title_sort | visual analytics of surveillance data on foodborne vibriosis, united states, 1973–2010 |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3236002/ https://www.ncbi.nlm.nih.gov/pubmed/22174586 http://dx.doi.org/10.4137/EHI.S7806 |
work_keys_str_mv | AT simsjennifern visualanalyticsofsurveillancedataonfoodbornevibriosisunitedstates19732010 AT isokpehiraphaeld visualanalyticsofsurveillancedataonfoodbornevibriosisunitedstates19732010 AT coopergabriellea visualanalyticsofsurveillancedataonfoodbornevibriosisunitedstates19732010 AT bassmichaelp visualanalyticsofsurveillancedataonfoodbornevibriosisunitedstates19732010 AT brownshyrethad visualanalyticsofsurveillancedataonfoodbornevibriosisunitedstates19732010 AT stjohnalisonl visualanalyticsofsurveillancedataonfoodbornevibriosisunitedstates19732010 AT guligpaula visualanalyticsofsurveillancedataonfoodbornevibriosisunitedstates19732010 AT cohlyharihp visualanalyticsofsurveillancedataonfoodbornevibriosisunitedstates19732010 |